Fractal Healthcheck
Fractal is a framework developed at the BioVisionCenter to process bioimaging data at scale in the OME-Zarr format and prepare the images for interactive visualization.
Fractal healthcheck is a monitoring tool which helps in operating Fractal instances. Find more information about Fractal in general and the other repositories at the Fractal home page.
Get started
$ python -m venv venv
$ source venv/bin/activate
$ python -m pip install -e .
[...]
Successfully installed annotated-types-0.7.0 bumpver-2024.1130 click-8.1.8 colorama-0.4.6 dnspython-2.7.0 email-validator-2.2.0 fractal-healthcheck-0.0.1 idna-3.10 lexid-2021.1006 psutil-6.1.1 pydantic-2.10.4 pydantic-core-2.27.2 pyyaml-6.0.2 toml-0.10.2 typing-extensions-4.12.2
$ fractal-health
Usage: fractal-health [OPTIONS] CONFIG_FILE
Try 'fractal-health --help' for help.
Error: Missing argument 'CONFIG_FILE'.
Development
$ python -m venv venv
$ source venv/bin/activate
$ python -m pip install -e .[dev]
[...]
$ pre-commit install
[...]
where pre-commit should have been already installed (e.g. through pipx install pre-commit).
How to make a release
From the development environment:
uv run bumpver update --patch --dry
Contributors and license
The Fractal project is developed by the BioVisionCenter at the University of Zurich, who contracts eXact lab s.r.l. for software engineering and development support.
Unless otherwise specified, Fractal components are released under the BSD 3-Clause License, and copyright is with the BioVisionCenter at the University of Zurich.
Release files for fractal-healthcheck 0.1.27
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| fractal_healthcheck-0.1.27.tar.gz | 16.5 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| fractal_healthcheck-0.1.27-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 31.6 kB
Release files / fractal_healthcheck-0.1.27.tar.gz
| Download URL | fractal_healthcheck-0.1.27.tar.gz |
|---|---|
| Size | 16.5 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
5e34256227fc95b19bba80469358817e48f692e2b3e999bbb3751da6a9d1ebb3
|
|
BLAKE2b-256 checksum How to use checksums |
19a7b3fa050483814c59b745b2ad9c82dd9f4e774fd03033e0dac0eb1b7bad08
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.13
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Aug 25, 2026.
Transparency logRelease files / fractal_healthcheck-0.1.27-py3-none-any.whl
| Download URL | fractal_healthcheck-0.1.27-py3-none-any.whl |
|---|---|
| Size | 15.1 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
78f32d029d920b1fddd8ca16d8c3c9a6088bba181945bb7ed3a2753517a90478
|
|
BLAKE2b-256 checksum How to use checksums |
30c247c704810db5e413593aaebabc5115352e6be7c6a3194811af1be63fd7e7
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.13
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Aug 25, 2026.
Transparency log
