frekil 0.1.6

Official Python SDK for Frekil API

Frekil SDK

The official Python SDK for the Frekil API.

Installation

pip install frekil

Usage

Authentication

To use the SDK, you'll need an API key from your Frekil account:

from frekil import FrekilClient

# Initialize the client with your API key
client = FrekilClient(api_key="your-api-key")

# Optionally specify a custom base URL (e.g., for development)
client = FrekilClient(
    api_key="your-api-key",
    base_url="https://dev.notatehq.com/api/sdk"
)

Working with Projects

List Projects

Get all projects the authenticated user has access to:

# Get all projects
projects = client.projects.list()

# Example response:
# [
#     {
#         "id": "uuid",
#         "name": "Project Name",
#         "description": "Project Description",
#         "role": "ADMIN",  # User's role in the project
#         "created_at": "2024-03-21T10:00:00Z",
#         "updated_at": "2024-03-21T10:00:00Z",
#         "is_ct_scan": true,
#         "tags": ["tag1", "tag2"]
#     },
#     ...
# ]

Get Project Membership

Get membership details for a specific project including user roles and status:

# Get project membership
project_id = "project-uuid"
memberships = client.projects.get_membership(project_id)

# Example response:
# [
#     {
#         "user_id": "uuid",
#         "email": "[e-mail]",
#         "name": "User Name",  # Full name or email if name not set
#         "role": "ADMIN",      # User's role in the project
#         "percentage": 100,    # User's allocation percentage
#         "is_active": true,    # Whether the user is active
#         "is_project_admin": true,  # Whether user is project admin
#         "created_at": "2024-03-21T10:00:00Z",
#         "updated_at": "2024-03-21T10:00:00Z"
#     },
#     ...
# ]

Get Project Images

Get all images in a project:

# Get project images
project_id = "project-uuid"
images = client.projects.get_images(project_id)

# Example response:
# [
#     {
#         "id": "images/image1.dcm",  # Full image key
#         "filename": "image1.dcm",   # Just the filename
#         "created_at": "2024-03-21T10:00:00Z",
#         "updated_at": "2024-03-21T10:00:00Z"
#     },
#     ...
# ]

Get Project Allocations

Get all allocations in a project, including user roles for both annotators and reviewers:

# Get project allocations
project_id = "project-uuid"
allocations = client.projects.get_allocations(project_id)

# Example response:
# [
#     {
#         "allocation_id": "uuid",
#         "image_id": "images/image1.dcm",  # Full image key
#         "image_filename": "image1.dcm",   # Just the filename
#         "annotator_email": "[e-mail]",  # May be null
#         "reviewer_email": "[e-mail]",    # May be null
#         "status": "PENDING",  # One of: PENDING, PENDING_REVIEW, APPROVED, REJECTED
#         "created_at": "2024-03-21T10:00:00Z",
#         "is_ground_truth": false
#     },
#     ...
# ]

Bulk Allocate Images

Allocate images to specific annotators and reviewers:

# Allocate images to specific annotators and reviewers
project_id = "project-uuid"
allocations = [
    {
        "image_key": "images/image1.dcm",  # Full image key
        "annotators": ["[e-mail]", "[e-mail]"],
        "reviewers": ["[e-mail]", "[e-mail]"]
    },
    {
        "image_key": "images/image2.dcm",
        "annotators": ["[e-mail]"],
        "reviewers": ["[e-mail]"]
    }
]

# Set override_existing_work=True to override allocations even if work has been done
result = client.projects.bulk_allocate_images(
    project_id=project_id,
    allocations=allocations,
    override_existing_work=False
)

# Example success response:
# {
#     "status": "success",
#     "message": "Successfully processed allocations",
#     "created_count": 5,      # Number of new allocations created
#     "updated_count": 2,      # Number of existing allocations updated
#     "overridden_count": 1,   # Number of allocations with work that were overridden
#     "total_allocations": 8,  # Total number of allocations processed
#     "override_used": true    # Whether override_existing_work was used
# }

# Example validation error response:
# {
#     "status": "validation_failed",
#     "errors": ["Missing image_key in allocation 1"],
#     "invalid_users": [
#         {
#             "email": "[e-mail]",
#             "role": "annotator",
#             "reason": "User is not a project member with annotator role",
#             "allocation_index": 1,
#             "image_key": "image1.dcm"
#         }
#     ],
#     "existing_work": [
#         {
#             "image_key": "image1.dcm",
#             "annotator": "[e-mail]",
#             "reviewer": "[e-mail]",
#             "allocation_index": 1,
#             "existing_work": [
#                 {
#                     "type": "annotation",
#                     "user": "[e-mail]",
#                     "created_at": "2024-03-21T10:00:00Z",
#                     "status": "completed"
#                 }
#             ],
#             "message": "Cannot modify allocation as work has already been done",
#             "can_override": true
#         }
#     ],
#     "message": "Please fix the following issues before proceeding:",
#     "instructions": {
#         "invalid_users": "Ensure all users exist and have the correct project role",
#         "existing_work": "Cannot modify allocations where work has already been done. Use override_existing_work=true to force changes.",
#         "errors": "Fix any missing or invalid data in the request"
#     },
#     "override_available": true,
#     "override_instructions": "To override existing work, set override_existing_work=true in the request body"
# }

Error Handling

The SDK uses custom exception classes to handle API errors:

from frekil.exceptions import FrekilAPIError, FrekilClientError

try:
    projects = client.projects.list()
except FrekilClientError as e:
    # Handle client errors (e.g., authentication issues, invalid parameters)
    print(f"Client error: {e} (Status: {e.status_code})")
    print(f"Error details: {e.error_details}")
except FrekilAPIError as e:
    # Handle API errors (e.g., server issues)
    print(f"API error: {e} (Status: {e.status_code})")
    print(f"Error details: {e.error_details}")

Development

Setup

# Clone the repository
git clone https://github.com/notatehq/frekil-python-sdk.git
cd frekil-python-sdk

# Install dependencies
pip install -e ".[dev]"

Testing

pytest

License

This project is licensed under the MIT License - see the LICENSE file for details.