DNase I seq QC pipeline

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  • License: Python Software Foundation License (GNU)
  • Author: Qian Qin
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GCAP is a python module for wrapping different tools to quality control DNase-seq and other open chromatin sequencing data.

GCAP is easy to start

GCAP -i "test_pair2.fastq,test_pair1.fastq;test_pair2.fastq,test_pair1.fastq" -n test -o test -s hg19 --pe --threads 18

We suggest using virtualenv to avoid python version library conflicts.

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Avatar for qinqian from gravatar.com qinqian

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  • License: Python Software Foundation License (GNU)
  • Author: Qian Qin
Classifiers

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This version

1.1-20140805

1.0-20131218

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