gda-importer 1.9.6

GDA Importer provides simple command-line utilities that aide the installation of Python packages.

GDA Importer

GDA Importer contains simple utilities that are helpful for installation and CI/CD of python packages. Install with

pip install -U gda-importer

and use the scripts ppinfo and pull-private-deps, described below. The only dependencies are toml and packaging.

ppinfo

ppinfo reads the contents of pyproject.toml files. It can be accessed as python -m gda_importer.ppinfo or as the installed script ppinfo.

Run ppinfo -h for details.

pull-private-deps

pull-private-deps installs dependencies specified in a private-deps.toml by whatever means necessary.

Why? We at GDA have many internal packages that are developed privately and require authentication. Unfortunately, it is not possible to give this specification in pyproject.toml or environment.yml because those sources do not provide authentication for private repositories. The pull-private-deps.py script allows us to install our code in different environments easily. If PEP 708 is ever finished, then some parts of this will become uneccesary. However, we also support different methods of installation, such as docker or local clones. We foresee a future where most of this functionality it replaced by newer tools like uv but we aren't there yet.

Private-Deps Options

The private-deps.toml file has stanzas for each dependency. The options in each stanza lead to different installation commands. Let's examine each of these cases.

Simple Case

["example-package[option1,option2]"]
  gitlab_host = "gitlab.example.com"
  gitlab_path = "groupname/projectname"

If CI_JOB_TOKEN is available, this results in pulling a wheel over HTTPS.

pip install -v example-package[option1,option2] --index-url https://gitlab-ci-token:$[e-mail]/api/v4/projects/groupname%2Fprojectname/packages/pypi/simple

If CI_JOB_TOKEN is missing, this results in pulling source over SSH.

pip install -v example-package[option1,option2]@git+ssh://[e-mail]/groupname/projectname.git

Version Set

Use version_set to specify a specific version or range of versions for installation of prebuilt wheels from a PyPI-style registry.

["example-package[option1,option2]"]
  gitlab_host = "gitlab.example.com"
  gitlab_path = "groupname/projectname"
  version_set = ">=1.0,<3.0"

If CI_JOB_TOKEN is available, this results in pulling a wheel over HTTPS, with pip checking versions.

pip install -v example-package[option1,option2]<3.0,>=1.0 --index-url https://gitlab-ci-token:$[e-mail]/api/v4/projects/groupname%2Fprojectname/packages/pypi/simple

If CI_JOB_TOKEN is missing, this results in pulling source over SSH, and version_set will be ignored.

pip install -v example-package[option1,option2]@git+ssh://[e-mail]/groupname/projectname.git

Force Src

If method = 'source', then a gitlab_spec must be specified, and version_set is irrelevant. Use gitlab_spec to specify a specifig git reference for installation from source.

["example-package[option1,option2]"]
  gitlab_host = "gitlab.example.com"
  gitlab_path = "groupname/projectname"
  method = 'source'
  gitlab_spec = "branch-or-commit-or-tag-ref"

If CI_JOB_TOKEN is available, this results in pulling source over HTTPS.

pip install -v example-package[option1,option2]@git+https://gitlab-ci-token:$[e-mail]/groupname/projectname.git@branch-or-commit-or-tag-ref

If CI_JOB_TOKEN is missing, this results in pulling source over SSH.

pip install -v example-package[option1,option2]@git+ssh://[e-mail]/groupname/projectname.git@branch-or-commit-or-tag-ref

version_set versus gitlab_spec

The version_set option is for version sets given by pip-style conditions. This only applies to package registries with the force_src = false option.

The gitlab_spec option is for gitlab references (branch names, commit hashes, tags) and only applies if method = 'source'.

If gitlab_spec and version_set are both specified and method = 'source', then to avoid confusion they are checked for consistency. If gitlab_spec looks like a semantic version (for example, the tag v3.0.1), it will be checked against version_set, and a warning will be issued if they do not match.

["example-package[option1,option2]"]
  gitlab_host = "gitlab.example.com"
  gitlab_path = "groupname/projectname"
  gitlab_spec = "v3.0.1"
  version_set = ">=1.0,<3.0"

ValueError: Version implied by gitlab_spec is not included in the version_set.

Controling Installation Methods

There are several ways to pull the code, overriding the contents of the toml file. We list them from most self-contained to most messy.

Consider the following toml.

["package-name[extra,option]"]
  gitlab_host = "gitlab.example.com"
  gitlab_path = "group/projectname"
  gitlab_spec = "v1.0.1"
  version_set = "==1.0.1"

The default behavior can be overridden with --method

Install as a Docker microservices

The standard GDA CI/CD pipeline builds Docker containers for any project that involves API endpoints.

Try this and remove the --dry_run if you are happy with the result.

pull-private-deps --dry_run --toml private-deps.toml --method docker

This produces an output like the following.

docker login gitlab.example.com:5115 -u git -p $UV_INDEX_PROJECTNAME_PASSWORD
docker pull gitlab.example.com:5115/group/projectname:v1-0-1
docker run -p 8000:80 gitlab.example.com:5115/group/projectname:v1-0-1

Install from Precompiled Wheel via Pip

The standard GDA CI/CD pipeline builds pip-installable wheels for any project that involves Python.

Try this and remove the --dry_run if you are happy with the result.

pull-private-deps --dry_run --toml private-deps.toml --method wheel

This produces an output like the following.

pip install "package-name[extra,option]==1.0.1" --index-url "https://gitlab-ci-token:$[e-mail]/api/v4/projects/group%2Fproject/packages/pypi/simple"

Install from Python Source via Pip

Pip allows installation directly from git repositories. This method may require additional work to prepare your build environment.

Try this and remove the --dry_run if you are happy with the result.

pull-private-deps --dry_run --toml private-deps.toml --method source

This produces an output like the following.

pip install package-name[extra,option]@git+https://gitlab-ci-token:$[e-mail]/group/projectname.git@v1.0.1

Clone and Install Manually

If all else fails, you can clone the repository, build, and install. This is the least-preferred option and the most likely to fail.

Try this and remove the --dry_run if you are happy with the result.

pull-private-deps --dry_run --toml private-deps.toml --method clone
pull-private-deps --dry_run --toml private-deps.toml --method local

This produces an output like the following.

git clone -b v1.0.1 https://gitlab:$[e-mail]/group/projectname.git package-name
pip install ./package-name

Caveats

• Package name must satisfy PyPA guidelines

• Extra options must satisfy PyPA guidelines

• pip install on your main package will be unaware of these dependencies, because these private-repository dependencies are installed after the other types of dependencies, and must be re-installed for each job in the CI/CD pipeline. Therefore, for pipeline efficiency, you should make sure that pyproject.toml or environment.yml contain whatever second-order public dependencies will be needed.

• If any of the included private dependencies have any Anaconda Binary Dependencies (see the next section), then these binary dependencies must be manually added to environment.yml.

Note Possible conda Dependencies

Regardless of how you follow the User Installation subsection below, be sure to check if there are any additional, conda-specific requirements for the package specified in environment.yml.

If there are any dependencies there other than the cookiecutter defaults, then these may be important to include in a working conda environment wherever you intend to use this package. If there are no additional dependencies there, then this step can be disregarded.