Skip to main content

tools to support genome and metagenome analysis

Project description

genome-grist README

PyPI License: 3-Clause BSD

genome-grist analyzes the strain composition of microbial metagenomes using minimum metagenome covers and produces a variety of compositional and taxonomic summaries.

Check out the quick start! And please also see the rest of the docs for more information!

Example: the strain composition of a gut microbiome (iHMP)

This figure was autogenerated by genome-grist.

an example image made with genome-grist


CTB 01/22

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

genome-grist-0.8.3.tar.gz (8.9 MB view details)

Uploaded Source

File details

Details for the file genome-grist-0.8.3.tar.gz.

File metadata

  • Download URL: genome-grist-0.8.3.tar.gz
  • Upload date:
  • Size: 8.9 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.0 requests/2.24.0 setuptools/54.1.1 requests-toolbelt/0.9.1 tqdm/4.50.2 CPython/3.7.6

File hashes

Hashes for genome-grist-0.8.3.tar.gz
Algorithm Hash digest
SHA256 48e17feb39336a81f909ca230fe0fd8879f8eb05bf8b760468443a3226cdc82a
MD5 dbbd40d754b0805b1dbd47e0f3a9d7b8
BLAKE2b-256 ae78b32aa408e2fa03ca04aacc2bf65d8d79c9223dd7755d9b0a1474e6e23544

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page