sourmash-plugin-branchwater

Last released Nov 30, 2023

fast command-line extensions for sourmash

twill

Last released Nov 23, 2023

A web browsing and testing language

pyo3-branchwater

Last released Nov 18, 2023

fast search and gather extensions for sourmash

sourmash

Last released Sep 15, 2023

tools for comparing biological sequences with k-mer sketches

sourmash-plugin-commonhash

Last released Aug 27, 2023

sourmash plugin to calculate common hashes across multiple sketches.

sourmash-plugin-abundhist

Last released Aug 15, 2023

sourmash plugin to calculate abundance profiles.

sourmash-mixers

Last released Aug 5, 2023

this meta-package installs a collection of sourmash plugins!

sourmash-plugin-sketchall

Last released Aug 3, 2023

sourmash plugin to sketch many sequence files

get-some-ncbi-genomes

Last released Aug 1, 2023

download one or more NCBI genomes by accession

sourmash-plugin-venn

Last released Aug 1, 2023

sourmash plugin to build venn diagrams.

screed

Last released Feb 18, 2023

a Python library for loading FASTA and FASTQ sequences

genome-grist

Last released Dec 7, 2022

tools to support genome and metagenome analysis

spacegraphcats

Last released Dec 4, 2022

tools for biological assembly graph neighborhood analysis

ribbity

Last released Jul 2, 2022

convert github issues into a mkdocs site

pinocchio

Last released May 18, 2021

pinocchio plugins for the nose testing framework

bbhash

Last released Oct 25, 2020

A Python wrapper for the BBHash Minimal Perfect Hash Function

khmer

Last released May 26, 2017

khmer k-mer counting library

syrah

Last released Dec 27, 2016

extract trusted k-mers from raw sequencing data

Oxli

Last released Dec 8, 2014

buoy

Last released Nov 15, 2014

figleaf

Last released Jan 10, 2008

figleaf code coverage tool

session2

Last released Oct 25, 2005

Persistent sessions for Quixote 2.x