genomehouse 1.2.0

Modular bioinformatics toolkit for sequence analysis, parsing, ML, and visualization.

GenomeHouse

GenomeHouse is a modular, user-friendly Python toolkit for bioinformatics and genomics research. It provides tools for sequence analysis, genomic data parsing, machine learning, visualization, and more—all under one roof.

Features

• Sequence analysis: reverse complement, motif search, GC content, translation
• Genomic data parsing: FASTA, FASTQ, VCF, GFF/GTF
• Machine learning pipelines for biological data
• Publication-quality data visualization
• Statistical analysis tools
• Extensible and user-friendly API

Installation

pip install genomehouse

Quick Start

from genomehouse import sequence_tools, genomic_parsers
seq = "ATGCGTAC"
print(sequence_tools.gc_content(seq))
for header, seq in genomic_parsers.parse_fasta("example.fasta"):
	print(header, seq)

CLI Usage

genomehouse-cli parse-fasta data/sample.fasta
genomehouse-cli gc-content ATGCGTAC

Documentation

See the docs/ folder for full API documentation and usage examples.

License

License

Source Code

GitHub Repository