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GraphRAG + LangGraph agent for intelligent knowledge graph reasoning over Neo4j

Project description

GibsGraph

Natural language queries for any Neo4j graph — automatically. Built by V.Gibson at Gibbr AB

CI Coverage License: MIT Python 3.12+

GibsGraph connects to any Neo4j knowledge graph, auto-discovers its schema, and lets you ask questions in plain English. It generates Cypher automatically, retrieves the relevant subgraph, and returns a grounded answer — with the Cypher shown so you can verify what was queried.

Changelog | Contributing


What it does (v0.3.5)

  • Natural language queries — ask anything about your Neo4j graph
  • Text-to-graph ingestiong.ingest("any text") extracts entities and relationships into Neo4j automatically
  • Expert knowledge graph — 920 records: 36 clauses, 133 functions, 446 examples, 23 modeling patterns, 318 best practices
  • Bundled expert data — works out of the box without loading data into Neo4j first (quality-filtered to ~849 records)
  • 4-stage validation — syntactic → structural → semantic → domain, with enterprise severity levels
  • Auto schema discovery — connects and learns your graph structure automatically
  • PCST subgraph pruning — prunes vector neighbourhoods to the most query-relevant subset (opt-in, requires gibsgraph[gnn])
  • Dual retrieval — vector search (when index exists) with text-to-Cypher fallback
  • Cypher self-healing — if generated Cypher fails, the error is sent back to the LLM for correction
  • Cypher transparency — see exactly what was queried
  • Visualization — Mermaid diagrams and Neo4j Bloom deep links
  • Secure by default — read-only transactions, parameterized Cypher, injection validation
  • LLM flexibility — OpenAI, Anthropic, Mistral, xAI/Grok — auto-detected from env keys

Planned (not yet implemented)

  • G-Retriever GNN reasoning

Quick start

pip install gibsgraph
from gibsgraph import Graph

# Connect — auto-detects LLM from your env keys
g = Graph("bolt://localhost:7687", password="your-password")

# Ask anything
result = g.ask("What movies did Tom Hanks act in?")
print(result)              # the answer
print(result.cypher)       # Cypher that was run
print(result.confidence)   # 0.0-1.0
print(result.visualization) # Mermaid diagram string

g.close()  # or use: with Graph(...) as g:

# Ingest text into your graph
g = Graph("bolt://localhost:7687", password="your-password", read_only=False)
g.ingest("Apple acquired Beats Electronics for $3 billion in 2014.", source="news")
g.close()

Configuration

Set environment variables (or pass them directly):

export NEO4J_URI=bolt://localhost:7687
export NEO4J_PASSWORD=your_password
export OPENAI_API_KEY=sk-...     # or ANTHROPIC_API_KEY, MISTRAL_API_KEY, XAI_API_KEY

Or use a .env file — copy .env.example to get started.


Installation

pip install gibsgraph

Optional extras:

pip install "gibsgraph[mistral]"  # Mistral LLM support
pip install "gibsgraph[gnn]"      # PCST pruning + G-Retriever GNN
pip install "gibsgraph[ui]"       # Streamlit demo UI
pip install "gibsgraph[full]"     # everything including dev tools

Docker

cp .env.example .env
# Edit .env with your Neo4j password and API key
docker compose up
# Open http://localhost:8501

Architecture

User Query
    |
    v
LangGraph Agent (agent.py)
    +-- retrieval/     <- Auto schema discovery + text-to-Cypher + vector search + PCST pruning
    +-- tools/         <- Cypher validator, Mermaid visualizer
    +-- training/      <- 4-stage validation (syntactic/structural/semantic/domain)
    +-- expert.py      <- ExpertStore + BundledExpertStore (JSONL fallback)
    +-- data/          <- Bundled expert JSONL (clauses, functions, examples, patterns, practices)
    +-- kg_builder/    <- Text to Neo4j via SimpleKGPipeline
    +-- gnn/           <- G-Retriever inference (planned)
    |
    v
Neo4j Knowledge Graph

Examples

Example Description
examples/regulatory_kg.py EU regulatory knowledge graph (gibs.dev use case)

Testing

281 unit tests, 80% coverage.

pytest                          # All tests
pytest tests/unit/              # Unit only
pytest tests/integration/       # Integration (requires Neo4j)
pytest --cov --cov-report=html  # With coverage report

Contributing

Contributions welcome! Please read CONTRIBUTING.md first.

pip install -e ".[dev]"
ruff check src/ tests/
mypy src/gibsgraph
pytest

License

MIT — see LICENSE


Acknowledgements

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