gpuparallel 0.2.2

Joblib-like interface for parallel GPU computations (e.g. data preprocessing)

GPUParallel

Joblib-like interface for parallel GPU computations (e.g. data preprocessing).

import torch
from gpuparallel import GPUParallel, delayed

def perform(idx, device_id, **kwargs):
    tensor = torch.Tensor([idx]).to(device_id)
    return (tensor * tensor).item()

result = GPUParallel(n_gpu=2)(delayed(perform)(idx) for idx in range(5))
print(list(result))  # result: [0.0, 1.0, 4.0, 9.0, 16.0], ordered in accordance with input parameters

Features:

• Initialize networks once on worker init
• Reuse initialized workers
• Preserve sample order: preserve_order flag, turned on by default
• Result is a generator
• Auto batching
• Simple logging from workers
• Main process inference mode for tasks debug (use debug = True)
• Progressbar with tqdm: progressbar flag
• Optional ignoring task errors: ignore_errors flag

Install

python3 -m pip install gpuparallel
# or
python3 -m pip install git+git://github.com/vlivashkin/gpuparallel.git

Examples

Initialize networks once on worker init

Function init_fn is called on init of every worker. All common resources (e.g. networks) can be initialized here.

from gpuparallel import GPUParallel, delayed

def init(device_id=None, **kwargs):
    global model
    model = load_model().to(device_id)

def perform(img, device_id=None, **kwargs):
    global model
    return model(img.to(device_id))
    
gp = GPUParallel(n_gpu=16, n_workers_per_gpu=2, init_fn=init)
results = gp(delayed(perform)(img) for img in fnames)

Reuse initialized workers

Once workers are initialized, they keep live until GPUParallel object exist. You can perform several queues of tasks without reinitializing worker resources:

gp = GPUParallel(n_gpu=16, n_workers_per_gpu=2, init_fn=init)
overall_results = []
for folder_images in folders:
    folder_results = gp(delayed(perform)(img) for img in folder_images)
    overall_results.extend(folder_results)
del gp  # this will close process pool to free memory

Result is a generator

GPUParallel call returns a generator to use results during caclulations (e.g. for sequential saving ordered results)

import h5py

gp = GPUParallel(n_gpu=16, n_workers_per_gpu=2, preserve_order=True)
result = gp(delayed(perform)(img) for img in images)

with h5py.File('output.h5') as f:
    result_dataset = f.create_dataset('result', shape=(300, 224, 224, 3))

    for idx, result in enumerate(result):
        result_dataset[idx] = result

Auto batching

Use class BatchGPUParallel for auto spliting tensor to workers. flat_result flag de-batches results (works only if single array/tensor returned)

arr = np.zeros((102, 103))
bgpup = BatchGPUParallel(task_fn=task, batch_size=3, flat_result=True, n_gpu=2)
flat_results = np.array(list(bgpup(arr)))

Simple logging from workers

print() inside a worker won't be seen in the main process, but you still can use logging to stderr of the main process. Use log_to_stderr() call to init logging, and log.info(message) to log info from workers

from gpuparallel import GPUParallel, delayed, log_to_stderr, log

log_to_stderr('INFO')

def perform(idx, worker_id=None, device_id=None):
    hi = f'Hello world #{idx} from worker #{worker_id} with {device_id}!'
    log.info(hi)

GPUParallel(n_gpu=2)(delayed(perform)(idx) for idx in range(2))

It will return:

[INFO/Worker-1(cuda:1)]:Hello world #1 from worker #1 with cuda:1!
[INFO/Worker-0(cuda:0)]:Hello world #0 from worker #0 with cuda:0!