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Autonomous MCP agent for graduate school applications: prof discovery + verified cold emails + SOP drafting + application tracking.

Project description

grad-agent

An autonomous MCP agent that helps you apply to fully funded MS and PhD programs.

Discover and draft

  • Discovers professors on arXiv in your research areas, or deadline-driven per program (run_program_batch)
  • Verifies each candidate is actually faculty (Semantic Scholar h-index, papers, affiliation), deduplicated by canonical authorId
  • Filters by region (target_regions: [US, Canada] in your profile; keyword table + homepage TLD + LLM fallback)
  • Scrapes their lab page for a recruiting signal + email address
  • Matches them to your strongest shipped project (tag overlap + TF-IDF semantic layer + learned response-rate bias)
  • Drafts a specific, fact-checked cold email: Claude Haiku writes a hook spanning the prof's recent papers, then a second call verifies every claim against the abstracts and rewrites anything unsupported
  • Scores each draft 1 to 10 for fit, with a one-line reason, so you can triage in seconds

Learn and follow through

  • Detects professor replies via read-only IMAP and tags the log automatically
  • Learns from outcomes: projects that earn replies rank up in future matching (outcome_report shows what works)
  • Drafts follow-up nudges for profs silent 10+ days; never nudges the same prof twice
  • Generates an interview prep one-pager when a prof replies: their papers summarised, likely questions, your talking points

Track everything

  • Compiles per-school SOPs to PDF (LaTeX), versioned so no draft is ever overwritten
  • Tracks outreach, LOR requests, program deadlines, and external scholarships (Mastercard, Commonwealth, Fulbright, Rhodes, and more) in xlsx/yaml
  • Emails every draft to your inbox for review; nothing is ever sent to a professor without you

Runs as a stdio MCP server for Claude Code / Claude Desktop / any MCP client, or as a plain CLI.

Published on:

Install

Pick one:

# Recommended for MCP clients (Claude Desktop, Claude Code, etc.)
uvx grad-agent server      # single-shot, no persistent install

# Persistent CLI install
pipx install grad-agent

# Or in a venv
python3 -m venv .venv && source .venv/bin/activate
pip install grad-agent

Set up in 5 minutes

grad-agent init

This writes:

  • ~/.grad-agent/profile.yaml — your identity, projects, preferences
  • ~/.grad-agent/programs.yaml — target programs (seeded)
  • ~/.grad-agent/scholarships.yaml — external scholarships with deadlines (seeded)
  • ~/.grad-agent/.env — secrets template

Fill in ~/.grad-agent/.env:

ANTHROPIC_API_KEY=sk-ant-...
SMTP_SERVER=smtp.gmail.com        # presets for Outlook/Yahoo/Zoho in the template
SMTP_PORT=587
SMTP_USERNAME=you@gmail.com
SMTP_PASSWORD=<gmail app password>
SMTP_FROM=you@gmail.com
# Optional:
S2_API_KEY=                       # free Semantic Scholar key, dedicated rate limits
IMAP_SERVER=imap.gmail.com        # read-only reply detection; defaults to SMTP creds
GITHUB_USERNAME=your-gh
GITHUB_TOKEN=github_pat_...
HF_USERNAME=your-hf

Fill in the important bits of ~/.grad-agent/profile.yaml:

  • name, identity_line, portfolio
  • cv_path, transcript_path (absolute paths)
  • degree_status: bachelors | masters (drives PhD eligibility gating)
  • target_term, target_degree
  • research_areas: [nlp, ai4health, ...]
  • target_regions: [US, Canada] — only draft for profs in these regions (empty = anywhere)
  • seed_projects: 3 to 10 flagship projects with name, pitch, link, tags

Profile edits apply immediately, even while a long-running MCP session is open.

Then:

grad-agent sync        # scan projects (GitHub + HF + local)
grad-agent run         # one batch, drafts land in your inbox

Register with Claude Code

Three commands, in order:

pipx install grad-agent
pipx ensurepath                              # opens ~/.local/bin on PATH
claude mcp add grad-agent grad-agent server

Prefer a zero-install one-liner? Skip pipx and use uvx:

claude mcp add grad-agent uvx grad-agent server

Then in a new Claude Code session:

/mcp

You should see grad-agent connected with ~34 tools. Before it does anything useful, run grad-agent init (or uvx grad-agent init) and fill in ~/.grad-agent/.env and ~/.grad-agent/profile.yaml as described in the setup section above.

If you skipped pipx ensurepath, grad-agent register-claude prints an absolute-path variant of the command that works without PATH changes.

Register with Claude Desktop

Edit ~/Library/Application Support/Claude/claude_desktop_config.json:

{
  "mcpServers": {
    "grad-agent": {
      "command": "uvx",
      "args": ["grad-agent", "server"]
    }
  }
}

The uvx command needs no prior install. If you already ran pipx install grad-agent, you can use "command": "grad-agent", "args": ["server"] instead.

Any other MCP client (Cursor, Zed, Windsurf) uses the same manifest shape; just point them at uvx grad-agent server.

Daily autonomous run (macOS)

The package ships a launchd plist template. To fire every day at 08:00:

cp /path/to/grad_agent/templates/com.gradagent.daily.plist ~/Library/LaunchAgents/
launchctl load ~/Library/LaunchAgents/com.gradagent.daily.plist

Every morning: replies auto-detected via IMAP, follow-up nudges drafted for silent profs, 3 verified faculty leads with fit scores (best fit first), hooks fact-checked against paper abstracts, plus program and scholarship deadline warnings — all in one review email.

What each MCP tool does

Tool Purpose
run_daily_batch(n, area) Full pipeline: verify → recruiting → hook + verify → draft → log
outreach_log_view(limit) Show last N rows of the outreach xlsx
outreach_mark_sent(prof, uni) Flag a row as actually sent to the prof
sync_catalog(source) Pull projects from github, hf, or local
list_projects_in_catalog() Show every project the matcher can see
list_programs() Your target programs
upcoming_deadlines(days) Any program deadline in the next N days
lor_add / lor_outstanding / lor_mark Recommendation-letter tracker
run_program_batch(program_id, n) Deadline-driven batch: draft for one program's faculty
followups_due(days) Drafted nudges for profs silent 10+ days
outreach_mark_followup(prof) Record a sent nudge (never nudged twice)
outreach_mark_response(prof, outcome) Tag replies; feeds the matcher's learning loop
outcome_report() Response rates by area and project
ingest_replies() Read-only IMAP scan; auto-tags replies in the log
interview_prep(prof) One-page brief: their papers, likely questions, your talking points
list_scholarships(region) External scholarships filtered by eligibility region
upcoming_scholarship_deadlines(days) Scholarship deadlines approaching
draft_cold_email(...) Manual per-prof draft
draft_sop(...) Compile a Columbia-style SOP PDF (versioned: sop_v1, v2, ...)
send_draft_to_me(path) Ship any draft file to your review inbox
discover_profs(area) arXiv + OpenReview scan (raw candidates, no verification)

Blog publishing tools (publish_article, update_article, ...) are gated behind blog.enabled: true in profile.yaml and are specific to the author's Turso-backed Next.js portfolio. Most users can ignore them.

What the agent will not do

  • Send any email to a professor. Every send is manual, from your Gmail, after you read the draft.
  • Touch your inbox beyond reading. IMAP access is read-only: it never sends, deletes, or marks messages.
  • Fabricate a paper claim. The hook goes through a second Claude call that rejects any claim not present in the abstracts, and rewrites.
  • Email the same professor twice. Deduplication is keyed on the Semantic Scholar authorId, with a name fallback for legacy rows, and follow-ups are marked so no prof is nudged more than once.
  • Draft for programs you are ineligible for. If your degree_status is bachelors, PhD programs that require an MSc first are filtered out. Same gate for scholarships outside your eligibility region.

Requirements

  • Python 3.10+
  • macOS or Linux (Windows untested)
  • pdflatex on PATH if you want SOP PDFs (macOS: MacTeX; Ubuntu: texlive-latex-recommended)
  • Anthropic API key
  • Gmail (or another SMTP) for the review-mailer

Where your data lives

Everything is under ~/.grad-agent/ by default, or $GRAD_AGENT_HOME if set:

~/.grad-agent/
  profile.yaml         identity + preferences (regions, seed projects, ...)
  programs.yaml        target programs with eligibility rules + deadlines
  scholarships.yaml    external scholarships with region eligibility + deadlines
  .env                 secrets (gitignored)
  data/
    outreach_log.xlsx  every prof surfaced or drafted, with fit scores + outcomes
    lor_log.xlsx       recommendation-letter tracker
    catalog.json       synced projects (GitHub + HF + local)
    s2_cache.json      Semantic Scholar lookups (14 day TTL)
    region_cache.json  LLM-inferred regions for unusual affiliations
    db.sqlite          drafts + status
  drafts/              per-school SOP versions + email drafts
    prep/              interview prep one-pagers

Contributing

MIT licensed. PRs welcome for: more program templates, non-Gmail SMTP presets, non-arXiv source adapters, and better prof-verification heuristics.

Author

Kwabena Obeng · i-ninte.github.io/portfolio/

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