Graph Context component for Knowledge Graph Assisted Research IDE
Project description
A flexible and type-safe graph database abstraction layer for Python, providing a robust foundation for building graph-based applications with strong validation and transaction support.
Table of Contents
-
🔍 Type-Safe: Full type hints and runtime type checking
-
🔒 Schema Validation: Strict schema validation for entities and relations
-
💼 Transaction Support: ACID-compliant transactions with commit/rollback
-
🎯 Property Validation: Rich property validation with constraints
-
🌐 Graph Operations: Comprehensive graph traversal and query capabilities
-
🔌 Extensible: Easy to implement custom storage backends
-
🧪 Well-Tested: High test coverage and comprehensive test suite
Installation
pip install graph-context
Quick Start
from graph_context import BaseGraphContext
from graph_context.types import EntityType, PropertyDefinition, RelationType
# Define your schema
class MyGraphContext(BaseGraphContext):
async def initialize(self) -> None:
# Register entity types
self.register_entity_type(EntityType(
name="Person",
properties={
"name": PropertyDefinition(type="string", required=True),
"age": PropertyDefinition(type="integer", required=False)
}
))
# Register relation types
self.register_relation_type(RelationType(
name="KNOWS",
from_types=["Person"],
to_types=["Person"]
))
async def cleanup(self) -> None:
pass
# Use the graph context
async def main():
context = MyGraphContext()
await context.initialize()
# Start a transaction
await context.begin_transaction()
try:
# Create entities
alice_id = await context.create_entity(
entity_type="Person",
properties={"name": "Alice", "age": 30}
)
bob_id = await context.create_entity(
entity_type="Person",
properties={"name": "Bob", "age": 25}
)
# Create relation
await context.create_relation(
relation_type="KNOWS",
from_entity=alice_id,
to_entity=bob_id
)
# Commit the transaction
await context.commit_transaction()
except:
# Rollback on error
await context.rollback_transaction()
raise
if __name__ == "__main__":
import asyncio
asyncio.run(main())
Core Concepts
Entities
Entities are nodes in the graph with:
- Type definitions (e.g., "Person", "Document")
- Properties with validation rules
- Unique IDs
Relations
Relations are edges connecting entities with:
- Type definitions (e.g., "KNOWS", "AUTHORED")
- Direction (from_entity → to_entity)
- Optional properties
- Type constraints
Transactions
All operations can be wrapped in transactions:
- Begin/commit/rollback support
- Isolation of changes
- Atomic operations
- Consistent state
Validation
Comprehensive validation system:
- Schema validation
- Property type checking
- Required/optional fields
- Default values
- Custom constraints (patterns, ranges, etc.)
Architecture
Component Overview
graph TD
A[Client Application] --> B[GraphContext Interface]
B --> C[BaseGraphContext]
C --> D[Custom Implementation]
C --> E[TestGraphContext]
subgraph "Core Components"
B
C
end
subgraph "Implementations"
D
E
end
style A fill:#f9f,stroke:#333,stroke-width:2px
style B fill:#bbf,stroke:#333,stroke-width:2px
style C fill:#dfd,stroke:#333,stroke-width:2px
Class Structure
classDiagram
class GraphContext {
<<interface>>
+initialize()
+cleanup()
+create_entity()
+get_entity()
+update_entity()
+delete_entity()
+create_relation()
+get_relation()
+update_relation()
+delete_relation()
+query()
+traverse()
}
class BaseGraphContext {
#_entity_types: Dict
#_relation_types: Dict
#_in_transaction: bool
+register_entity_type()
+register_relation_type()
+validate_entity()
+validate_relation()
#_check_transaction()
}
class CustomImplementation {
-storage_backend
+initialize()
+cleanup()
+create_entity()
+get_entity()
... other implementations
}
GraphContext <|-- BaseGraphContext
BaseGraphContext <|-- CustomImplementation
Transaction Flow
sequenceDiagram
participant C as Client
participant G as GraphContext
participant T as Transaction Manager
participant S as Storage
C->>G: begin_transaction()
G->>T: create transaction
T->>S: create snapshot
C->>G: create_entity()
G->>T: validate & store
T->>S: store in transaction
alt Success
C->>G: commit_transaction()
G->>T: commit changes
T->>S: apply changes
else Error
C->>G: rollback_transaction()
G->>T: rollback changes
T->>S: restore snapshot
end
Validation Pipeline
flowchart LR
A[Input] --> B{Schema Check}
B -->|Valid| C{Type Check}
B -->|Invalid| E[Schema Error]
C -->|Valid| D{Constraint Check}
C -->|Invalid| F[Type Error]
D -->|Valid| G[Validated Data]
D -->|Invalid| H[Validation Error]
style A fill:#f9f
style E fill:#f66
style F fill:#f66
style H fill:#f66
style G fill:#6f6
API Reference
Entity Operations
# Create an entity
entity_id = await context.create_entity(
entity_type="Person",
properties={"name": "Alice"}
)
# Get an entity
entity = await context.get_entity(entity_id)
# Update an entity
await context.update_entity(
entity_id,
properties={"age": 31}
)
# Delete an entity
await context.delete_entity(entity_id)
Relation Operations
# Create a relation
relation_id = await context.create_relation(
relation_type="KNOWS",
from_entity=alice_id,
to_entity=bob_id,
properties={"since": 2023}
)
# Get a relation
relation = await context.get_relation(relation_id)
# Update a relation
await context.update_relation(
relation_id,
properties={"strength": "close"}
)
# Delete a relation
await context.delete_relation(relation_id)
Query and Traversal
# Query relations
results = await context.query({
"start": alice_id,
"relation": "KNOWS",
"direction": "outbound"
})
# Traverse the graph
results = await context.traverse(
start_entity=alice_id,
traversal_spec={
"max_depth": 2,
"relation_types": ["KNOWS"],
"direction": "any"
}
)
Development
Setup
# Clone the repository
git clone https://github.com/yourusername/graph-context.git
cd graph-context
# Create and activate virtual environment
python -m venv .venv
source .venv/bin/activate # On Windows: .venv\Scripts\activate
# Install dependencies
pip install -e ".[dev]"
Running Tests
# Run all tests
pytest
# Run tests with coverage
pytest --cov=src/graph_context
# Run specific test file
pytest tests/graph_context/test_context_base.py
Code Style
This project uses ruff for code formatting and linting:
# Format code
ruff format .
# Run linter
ruff check .
Contributing
Contributions are welcome! Please feel free to submit a Pull Request. For major changes, please open an issue first to discuss what you would like to change.
Please make sure to update tests as appropriate.
Guidelines
- Fork the repository
- Create your feature branch (
git checkout -b feature/amazing-feature) - Commit your changes (
git commit -m 'Add some amazing feature') - Push to the branch (
git push origin feature/amazing-feature) - Open a Pull Request
License
This project is licensed under the MIT License - see the LICENSE file for details.
Acknowledgments
- Thanks to all contributors who have helped shape this project
- Inspired by graph database concepts and best practices
Documentation
- Graph Context Architecture
- Event System - Flexible pub/sub system for implementing cross-cutting concerns
- Caching Implementation Plan
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