GraphCompass
GraphCompass (Graph Comparison Tools for Differential Analyses in Spatial Systems) is a Python-based framework that brings together a robust suite of graph analysis and visualization methods, specifically tailored for the differential analysis of cell spatial organization using spatial omics data. It is developed on top on Squidpy and AnnData.
Visit our repository for documentation and tutorials.
GraphCompass key analysis features include:
- Cell-type-specific subgraphs comparison.
- Cellular neighborhoods comparison.
- Entire graphs comparison.
Installation
Install GraphCompass via PyPI by running:
pip install graphcompass
Contributing to GraphCompass
We are happy to collaborate. If you want to contribute to GraphCompass, head over to our GitHub repository and open an issue to discuss what you would like to change.
2 maintainers
Metadata
2 maintainers
Release files for graphcompass 0.2.5
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| graphcompass-0.2.5.tar.gz | 2.1 MB | Without provenance | Details for graphcompass-0.2.5.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| graphcompass-0.2.5-py3-none-any.whl | Python 3 | none | any | Details for graphcompass-0.2.5-py3-none-any.whl |
Total release size: 2.1 MB
Release files / graphcompass-0.2.5.tar.gz
| Download URL | graphcompass-0.2.5.tar.gz |
|---|---|
| Size | 2.1 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
a629e645259ce1b0a39456af16d14120a8e2dfd7bbb13276025864ec2fa75ebc
|
|
BLAKE2b-256 checksum How to use checksums |
5d5e1ba0df8dd7b640e9fbbad3af76c61bbfcce1e07eaac56e2601a8d8bf0b2b
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.0.1 CPython/3.10.0
|
Release files / graphcompass-0.2.5-py3-none-any.whl
| Download URL | graphcompass-0.2.5-py3-none-any.whl |
|---|---|
| Size | 32.9 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
38dd72af4d662d2de1421a3da3a31e3416dadc21c3f9552574c20bb0c42a350b
|
|
BLAKE2b-256 checksum How to use checksums |
92632895dcf17ad4fcd0ceb6ecd26f4859f343b3492f8626d03ebcb857d91911
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.0.1 CPython/3.10.0
|
Security for graphcompass 0.2.5
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
No provenance found
None of the files in this release were uploaded with provenance metadata.
A note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
