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Graph similarity algorithms based on NetworkX.

Project Description
graphsim
--------

Graph similarity algorithms based on NetworkX.

**BSD Licensed**

[![Build Status](https://travis-ci.org/caesar0301/graphsim.svg?branch=master)](https://travis-ci.org/caesar0301/graphsim)


Install
-------

First, install building tool:

$ yum install -y scons

On Mac OS:

$ brew install scons

Then install graphsim via PyPI:

$ pip install -U graphsim

**Permission Issue:** `sudo` is required to give permission to install cpp modules into /usr/local/{lib,include}.


**NOTE**: `libtacsim` was tested on Ubuntu 12.04, Ubuntu 16.04, CentOS 6.5 and Mac OS 10.11.2.


Usage
-----

>>> import graphsim as gs


Supported algorithms
--------------------

* `gs.ascos`: Asymmetric network Structure COntext Similarity, by Hung-Hsuan Chen et al.
* `gs.nsim_bvd04`: node-node similarity matrix, by Blondel et al.
* `gs.hits`: the hub and authority scores for nodes, by Kleinberg.
* `gs.nsim_hs03`: node-node similarity with mismatch penalty, by Heymans et al.
* `gs.simrank`: A Measure of Structural-Context Similarity, by Jeh et al.
* `gs.simrank_bipartite`: SimRank for bipartite graphs, by Jeh et al.
* `gs.tacsim`: Topology-Attributes Coupling Similarity, by Xiaming Chen et al.
* `gs.tacsim_combined`: A combined topology-attributes coupling similarity, by Xiaming Chen et al.
* `gs.tacsim_in_C`: an efficient implementation of TACSim in pure C.
* `gs.tacsim_combined_in_C`: an efficient implementation of combined TACSim in pure C.


Supported utilities
-------------------

* `gs.normalized`: L2 normalization of vectors, matrices or arrays.
* `gs.node_edge_adjacency`: Obtain node-edge adjacency matrices in source and dest directions.

Citation
----------

```tex
@article{Chen2017,
title = "Discovering and modeling meta-structures in human behavior from city-scale cellular data",
journal = "Pervasive and Mobile Computing ",
year = "2017",
issn = "1574-1192",
doi = "http://dx.doi.org/10.1016/j.pmcj.2017.02.001",
author = "Xiaming Chen and Haiyang Wang and Siwei Qiang and Yongkun Wang and Yaohui Jin"
}
```

Author
------

Xiaming Chen <chenxm35@gmail.com>
Release History

Release History

This version
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0.2.9

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0.2.6.8

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0.2.6.7

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0.2.6.6

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0.2.6.5

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0.2.6.4

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0.2.6.3

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0.2.6.2

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0.2.6.1

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0.2.6

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0.2.5.3

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0.2.5.2

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0.2.5

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0.2.4

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0.2.3

Download Files

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File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
graphsim-0.2.9.tar.gz (15.8 kB) Copy SHA256 Checksum SHA256 Source Jun 8, 2017

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