gridseispy 0.1.3

A Python library for seismic data processing and visualization.

GridSeisPy

A Python library for seismic data processing and visualization, designed for efficiency and ease of use.

Features

• Workflow Session Management: Automatically save and restore processed objects (SeisData, Horiz) to disk, allowing you to resume your work across different sessions.
• Fast I/O: Efficiently read and write SEG-Y files.
• Intuitive Slicing: Slice data by inline/crossline, time/depth, or along and between horizons (e.g., sgy.getInline(100), sgy[..., top:btm]).
• Advanced Indexing: Supports numpy-style regional extraction using np.ogrid.
• Horizon Arithmetic: Perform calculations directly on horizon objects (e.g., thickness = btm_horiz - top_horiz).
• Grid & Coordinate Tools: Built-in utilities for grid and coordinate transformations.
• Easy Visualization: The library's outputs are standard NumPy arrays, making it straightforward to integrate with plotting libraries like Matplotlib.

Installation

You can install GridSeisPy via pip:

pip install GridSeisPy

Complete Walkthrough

This example demonstrates the core workflow: creating a SEG-Y file, loading it, saving and restoring the session, performing advanced operations (like slicing, horizon math, and coordinate conversion), and finally visualizing the results with Matplotlib.

This code is self-contained and runnable.

import numpy as np
import matplotlib.pyplot as plt
from pathlib import Path
from GridSeisPy import SeisData, Horiz, BinField, TraceField, CVDFile

# --- Plotting Setup ---
plt.rcParams['font.sans-serif'] = ['SimHei']
plt.rcParams['axes.unicode_minus'] = False

# --- 1. Setup Session and Paths ---
print("--- 1. Setting up session and paths ---")
output_dir = Path("usage_output")
output_dir.mkdir(exist_ok=True)
sgy_path = output_dir / "demo_seismic.sgy"
CVDFile.SetVDPath(output_dir)
print(f"Session files will be saved in: {output_dir.resolve()}\\n")

# --- 2. Create a Demo SEG-Y File ---
print(f"--- 2. Creating a new SEG-Y file at '{sgy_path}' ---")
n_il, n_xl, n_smp = 50, 60, 120
trace_cnt = n_il * n_xl

with SeisData(str(sgy_path), mode='w+') as sgy_writer:
    headers = np.zeros(trace_cnt, dtype=sgy_writer.config.trace_header_dtype)
    headers[TraceField.InlineID.name] = np.repeat(np.arange(100, 100 + n_il), n_xl)
    headers[TraceField.XlineID.name] = np.tile(np.arange(500, 500 + n_xl), n_il)
    headers[TraceField.SamplePoints.name] = n_smp
    headers[TraceField.SampleRate.name] = 2000

    data = np.array([np.sin(np.linspace(0, 2 * np.pi, n_smp)) * (i / trace_cnt)
                     for i in range(trace_cnt)], dtype='f4')

    bh = sgy_writer.binary_header
    bh[BinField.SamplePoints.name] = n_smp
    bh[BinField.SampleRate.name] = 2000
    sgy_writer.binary_header = bh
    
    sgy_writer.SetTraceMapping(set_trace_cnt=trace_cnt)
    sgy_writer.SetTraceHeader(np.arange(trace_cnt), headers)
    sgy_writer.SetTraceData(np.arange(trace_cnt), data)
print("SEG-Y file created successfully.\\n")

# --- 3. Load Data, Save, and Restore Session ---
print("--- 3. Loading, saving, and restoring session ---")
sgy = SeisData(str(sgy_path)).load()
sgy.Update2VDFile('my_demo_sgy')
sgy_restored = SeisData.GetObjByName('my_demo_sgy')
print(f"Loaded and restored data with shape: {sgy_restored.shape}\\n")

# --- 4. Create Horizons and Perform Operations ---
print("--- 4. Performing horizon operations and advanced slicing ---")
top_horiz = sgy_restored.getSeiHoriz()
btm_horiz = sgy_restored.getSeiHoriz()
xx, yy = np.meshgrid(np.linspace(0, 1, sgy_restored.shape[1]), np.linspace(0, 1, sgy_restored.shape[0]))
top_time = 40 + (np.sin(xx * 2 * np.pi) + np.cos(yy * 2 * np.pi)) * 10
btm_time = top_time + 20
top_horiz.elems['time'] = top_time.astype('i4')
btm_horiz.elems['time'] = btm_time.astype('i4')

# Operations
inline_to_show = sgy_restored.arrInlines[sgy_restored.shape[0] // 2]
inline_slice = sgy_restored.getInline(inline_to_show)
slice_along_top = sgy_restored[..., top_horiz]
time_thickness = btm_horiz - top_horiz

center_i, center_j = sgy_restored.shape[0] // 2, sgy_restored.shape[1] // 2
center_x, center_y = sgy_restored.elems[sgy_restored.kX][center_i, center_j], sgy_restored.elems[sgy_restored.kY][center_i, center_j]
converted_i, converted_j = sgy_restored.xy2ij([center_x], [center_y])
print(f"Coordinate ({center_x:.2f}, {center_y:.2f}) converts to grid index ({converted_i[0]}, {converted_j[0]})\\n")


# --- 5. Visualization ---
print("--- 5. Visualizing the results ---")
fig, axes = plt.subplots(1, 3, figsize=(18, 6))
fig.suptitle("GridSeisPy 'usage.py' 演示")

# a. Inline Profile
sgy = sgy_restored
axes[0].imshow(inline_slice.T, cmap='seismic', aspect='auto',
               extent=[sgy.arrXlines[0], sgy.arrXlines[-1], sgy.smp_stop, sgy.smp_start])
axes[0].set_title(f"剖面: Inline {inline_to_show}")
axes[0].set_xlabel("Xline")
axes[0].set_ylabel("Time (ms)")

# b. Slice Along Horizon
im = axes[1].imshow(slice_along_top, cmap='viridis', aspect='auto',
                    extent=[sgy.arrXlines[0], sgy.arrXlines[-1], sgy.arrInlines[-1], sgy.arrInlines[0]])
axes[1].set_title("沿顶层位切片")
axes[1].set_xlabel("Xline")
axes[1].set_ylabel("Inline")
fig.colorbar(im, ax=axes[1], label="Amplitude")

# c. Time Thickness Map
im_thick = axes[2].imshow(time_thickness.elems[time_thickness.kField], cmap='jet', aspect='auto',
                         extent=[sgy.arrXlines[0], sgy.arrXlines[-1], sgy.arrInlines[-1], sgy.arrInlines[0]])
axes[2].set_title("层位时间厚度图 (btm - top)")
axes[2].set_xlabel("Xline")
axes[2].set_ylabel("Inline")
fig.colorbar(im_thick, ax=axes[2], label="Time Thickness (ms)")

plt.tight_layout(rect=[0, 0.03, 1, 0.95])
plt.show()

Future Plans

GridSeisPy is under active development. Here are some of the exciting features planned for the future:

• Easy Seismic Attribute Extraction: We plan to add a comprehensive module for calculating various seismic attributes. The goal is to make extracting attributes like instantaneous frequency, phase, and amplitude as simple as a few lines of code.
• AI Integration: A major focus will be on bridging the gap between seismic data and modern AI. We aim to provide seamless integration with popular deep learning frameworks (like PyTorch and TensorFlow) to facilitate research and application of AI in seismic interpretation.

License

This project is licensed under the MIT License.