HiC1Dmetrics pip version
Project description
HiC1Dmetrics
This repository contain code and basic tutorial for "HiC1Dmetrics"
Important Update
(Feb 2024) Now h1d v0.2.8 support the user-difined juicertools. You can use your own version of juicer tool by the --juicertool parameter
Installation
HiC1Dmetrics was based on python3 and released on PyPI, it could be installed by
pip install h1d
After installation, try:
$ h1d -V
h1d version 0.1.0
Documents
For detailed usage, please refer to h1d Documents
Web application
Please click hic1d webapp
Citation
Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. Briefings in Bioinformatics, bbab509,2021.
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