HiC1Dmetrics
This repository contain code and basic tutorial for "HiC1Dmetrics"
Important Update
(Feb 2024) Now h1d v0.2.8 support the user-difined juicertools. You can use your own version of juicer tool by the --juicertool parameter
Installation
HiC1Dmetrics was based on python3 and released on PyPI, it could be installed by
pip install h1d
After installation, try:
$ h1d -V
h1d version 0.1.0
Documents
For detailed usage, please refer to h1d Documents
Web application
Please click hic1d webapp
Citation
Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. Briefings in Bioinformatics, bbab509,2021.
1 maintainer
Metadata
1 maintainer
Release files for h1d 0.2.12
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| h1d-0.2.12.tar.gz | 26.1 MB | Without provenance | Details for h1d-0.2.12.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| h1d-0.2.12-py3-none-any.whl | Python 3 | none | any | Details for h1d-0.2.12-py3-none-any.whl |
Total release size: 52.3 MB
Release files / h1d-0.2.12.tar.gz
| Download URL | h1d-0.2.12.tar.gz |
|---|---|
| Size | 26.1 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
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twine/6.1.0 CPython/3.11.5
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Release files / h1d-0.2.12-py3-none-any.whl
| Download URL | h1d-0.2.12-py3-none-any.whl |
|---|---|
| Size | 26.1 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.11.5
|
Security for h1d 0.2.12
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