hdsemg-pipe 0.3.0

🧠 hdsemg-pipe

HDsEMG Workflow Manager

hdsemg-pipe is a Python-based application for processing HD-sEMG (High-Density Surface Electromyography) data. It provides a user-friendly interface for managing and analyzing HD-sEMG recordings.

Documentation

The full documentation for hdsemg-pipe is available at:

📚 Usage Documentation

This includes detailed guides on installation, usage, and contributing to the project.

Installation

In order to install hdsemg-pipe, follow the instructions in the installation guide.

Quick Installation

Installation from PyPi

1. Available as a Python package and can be installed via pip:

  pip install hdsemg-pipe

2. After the installation, you can run the application from the command line:

  python -m hdsemg_pipe.main

Installation from source

1. Create a virtual environment (recommended):

    # Create a virtual environment
    python -m venv venv
    
    # Activate the virtual environment
    # On Windows:
    venv\Scripts\activate
    # On Unix or MacOS:
    source venv/bin/activate

    # install Dependencies
    pip install -r requirements.txt

    # Compile the QT Resources 
    cd ./hdsemg_pipe
    pyrcc5 resources.qrc -o resources_rc.py
    

Features

• 📁 File management and preprocessing
• 🔗 Grid association and ROI definition
• 🎚️ Channel selection and decomposition result visualization
• ⚡️ Integration with external tools like
  • openhdemg
  • Swarm Contrastive Decomposition
  • SCD Edition
  • MUedit

Acknowledgments

This project is beeing developed with support from:

Hochschule Campus Wien Department of Physiotherapy

Supervised by Dr. rer. nat. Harald Penasso (harald.penasso@hcw.ac.at)