Skip to main content

The Hyperscanning Python Pipeline.

Project description

HyPyP 🐍〰️🐍

The Hyperscanning Python Pipeline

PyPI version shields.io license Mattermost

⚠️ This software is in beta and thus should be considered with caution. While we have done our best to test all the functionalities, there is no guarantee that the pipeline is entirely bug-free.

📖 See our paper for more explanation and our plan for upcoming functionalities (aka Roadmap).

🤝 If you want to help you can submit bugs and suggestions of enhancements in our Github Issues section.

🤓 For the motivated contributors, you can even help directly in the developpment of HyPyP. You will need to install Poetry (see section below).

Contributors

Florence BRUN, Anaël AYROLLES, Phoebe CHEN, Amir DJALOVSKI, Yann BEAUXIS, Suzanne DIKKER, Guillaume DUMAS

Installation

pip install HyPyP

Documentation

HyPyP documentation of all the API functions is available online at hypyp.readthedocs.io

For getting started with HyPyP, we have designed a little walkthrough: getting_started.ipynb

API

🛠 io.py — Loaders (Florence, Anaël, Guillaume)

🧰 utils.py — Basic tools (Amir, Florence, Guilaume)

⚙️ prep.py — Preprocessing (ICA & AutoReject) (Anaël, Florence, Guillaume)

🔠 analyses.py — Power spectral density and wide choice of connectivity measures (Phoebe, Suzanne, Florence, Guillaume)

📈 stats.py — Statistics (permutations & cluster statistics) (Florence, Guillaume)

🧠 viz.py — Inter-brain visualization (Anaël, Amir, Florence, Guillaume)

🎓 Tutorials - Examples & documentation (Anaël, Florence, Yann, Guillaume)

Poetry installation (only for developpers)

Step 1: pip install poetry

Step 2: git clone git@github.com:ppsp-team/HyPyP.git

Step 3: cd HyPyP

Step 4: poetry install

Step 5: poetry shell

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for hypyp, version 0.3.0b3
Filename, size File type Python version Upload date Hashes
Filename, size hypyp-0.3.0b3-py3-none-any.whl (48.8 kB) File type Wheel Python version py3 Upload date Hashes View
Filename, size hypyp-0.3.0b3.tar.gz (46.8 kB) File type Source Python version None Upload date Hashes View

Supported by

AWS AWS Cloud computing Datadog Datadog Monitoring Facebook / Instagram Facebook / Instagram PSF Sponsor Fastly Fastly CDN Google Google Object Storage and Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Salesforce Salesforce PSF Sponsor Sentry Sentry Error logging StatusPage StatusPage Status page