ibeatles 1.2.0

Bragg edge strain mapping

iBeatles

GUI to automatically fit Bragg Edges, calculate and display strain mapping factors.

Installation

From PyPI (recommended)

To install the latest release from PyPI, use the following command:

pip install ibeatles

This should install the latest release of iBeatles and all its dependencies. To start the application, use the following command:

python -m ibeatles

which will start the GUI application. For command-line interface (CLI) application, use the following command:

python -m ibeatles --no-gui <CONFIG_FILE>

From Conda

To install the latest release from Conda, use the following command:

micromamba install -c conda-forge -c neutronimaging ibeatles

This should install the latest release of iBeatles and all its dependencies. To start the application, use the following command:

python -m ibeatles

which will start the GUI application. For command-line interface (CLI) application, use the following command:

python -m ibeatles --no-gui <CONFIG_FILE>

From Source

Check the instructions in the Development Environment Setup section to setup the development environment for iBeatles.

Development Environment Setup

It is recommended to use a virtual environment to setup the development environment for iBeatles. The following instructions are for setting up a virtual development environment using pixi. For detailed instructions on how to install pixi, please refer to the pixi documentation.

• Install pixi:

curl -fsSL https://pixi.sh/install.sh | bash

• Clone the iBeatles repository:

git clone [e-mail]:ornlneutronimaging/iBeatles.git

• Install the dependencies:

cd iBeatles
pixi install

Note that pixi install will install all dependencies, including the editable version of iBeatles.

By default, pixi is configured to use detached-environments so that you can build the conda packages directly in the repo. This settings can be changed by pixi config set detached-environments false if needed.

Run iBeatles

There are several ways to start the application:

• Use the entry script to start the GUI application.

pixi run ibeatles

• Use pixi tasks run to start the GUI application.

# to start GUI application
pixi run start
# to start CLI application
pixi run cli  <CONFIG_FILE>

• Use Python interpreter to start the GUI application.

# start GUI application
pixi run python -m ibeatles
# start CLI application
pixi run python -m ibeatles --no-gui <CONFIG_FILE>

Run Tests

To run the tests, use the following command:

pixi run test

Alternatively, you can always invoke the Python interpreter directly:

python -m pytest

Note: we recommend using pixi to run the tests as it will ensure that the correct environment is used.

Build Documentation

More to come...

Packaging

PyPI Package

To build the PyPI package, use the following command:

pixi run build

This will create a dist directory containing the PyPI package.

Conda Package

To build the Conda package, use the following command:

pixi run build-conda

This will build the Conda packages in the conda.recipe directory.

To clean up all the builds, use

pixi run clean

If you prefer to clean all the environments (not builds), use

pixi clean

which will remove all the environments created by pixi.