idopnetwork 0.1.2

idopNetwork: complex systems analysis toolkit — curve fitting, functional clustering, network reconstruction, and topological data analysis

idopNetwork

A Python toolkit for complex systems data analysis, implementing:

• Curve Fitting: Power-law fitting y = a·x^b with data transformation and quasi-dynamic ranking
• Functional Clustering (FunClu): EM Gaussian mixture clustering with power-mean models
• Network Reconstruction (NetRecon): Legendre basis expansion + constrained sparse regression (IDOPRegressor)
• Network Analysis (NetAnal): GLMY persistent path homology and network depth analysis

Installation

pip install idopnetwork

For machine learning extras:

pip install idopnetwork[ml]

Usage

from idopnetwork.curve_fitting import fit_power_loglinear, get_power_function_sample
from idopnetwork.clustering import FunClu
from idopnetwork.network import IDOPRegressor
from idopnetwork.analysis import run_glmy

Citation

If you use idopNetwork in your research, please cite:

Wang, Y. et al. "idopNetwork: An integrative platform for complex systems analysis." (in preparation)