General linear symbolic + numeric uncertainty propagation, weighted linear regression
Project description
ieeLabTools
ieeLabTools is a Python library for automating uncertainty propagation and weighted linear regression in physics and engineering lab work. It eliminates manual symbolic differentiation and repetitive numeric error calculation.
Features
| Class | What it does |
|---|---|
Yvel |
Symbolic and numeric uncertainty propagation via partial derivatives |
WeightedLinregress |
Weighted least-squares linear regression with y-axis error support |
- Handles an arbitrary number of variables and measurements
- Returns symbolic SymPy expressions for use in lab reports
- Vectorised numeric evaluation over full measurement series (NumPy)
- Lightweight — only
sympyandnumpyrequired
Installation
pip install ieeLabTools
Quick start
Uncertainty propagation (Yvel)
import sympy as sp
import numpy as np
from ieeLabTools import Yvel
# Define the function symbolically
U, I = sp.symbols("U I")
R = U / I
# Instantiate – pass vars explicitly to guarantee column order
calc = Yvel(R, vars=[U, I])
# Inspect the symbolic error formula
print(calc.symbolic())
# sqrt(σI**2*U**2/I**4 + σU**2/I**2)
# Real lab data: voltage divider measurements
U_values = np.array([0.131, 0.505, 1.370, 2.944, 6.74])
I_values = np.full(5, 10e-3) # 10 mA constant current
U_errors = np.array([6.56e-4, 2.526e-3, 6.851e-3, 1.4721e-2, 3.3701e-2])
I_errors = np.zeros(5) # current source assumed perfect
# Stack into m×k matrices (m measurements, k variables)
values = np.column_stack([U_values, I_values])
sigmas = np.column_stack([U_errors, I_errors])
sigma_R = calc.numeric(values, sigmas)
print(sigma_R)
# [0.0656 0.2526 0.6851 1.4721 3.3701]
Column order matters. The order of columns in
valuesandsigmasmust match the order of variables invars. Always passvarsexplicitly.
Weighted linear regression (WeightedLinregress)
import numpy as np
from ieeLabTools import WeightedLinregress
x = np.array([1.0, 2.0, 3.0, 4.0, 5.0])
y = np.array([2.1, 3.9, 6.2, 7.8, 10.1])
y_err = np.array([0.1, 0.2, 0.1, 0.3, 0.2]) # individual y uncertainties
reg = WeightedLinregress(y_err, x, y)
slope, intercept, slope_err, intercept_err = reg.fit()
print(f"slope = {slope:.4f} ± {slope_err:.4f}")
print(f"intercept = {intercept:.4f} ± {intercept_err:.4f}")
The fit minimises $\chi^2 = \sum_i \frac{(y_i - a - b x_i)^2}{\sigma_i^2}$ using the closed-form weighted least-squares solution:
$$ b = \frac{W \sum w_i x_i y_i - \sum w_i x_i \sum w_i y_i}{D}, \quad a = \frac{\sum w_i x_i^2 \sum w_i y_i - \sum w_i x_i \sum w_i x_i y_i}{D} $$
where $w_i = 1/\sigma_i^2$ and $D = W \sum w_i x_i^2 - \left(\sum w_i x_i\right)^2$.
API reference
Yvel(f, vars=None)
| Parameter | Type | Description |
|---|---|---|
f |
sympy.Expr |
Function to propagate errors through |
vars |
list[Symbol] |
Variables in column order (recommended; auto-detected if omitted) |
| Method | Returns | Description |
|---|---|---|
.symbolic() |
sympy.Expr |
Symbolic error propagation expression |
.numeric(values, sigmas) |
np.ndarray shape (m,) |
Numeric uncertainties for m measurement rows |
values and sigmas are both m × k array-likes where m is the number of measurements and k is the number of variables.
WeightedLinregress(y_sigma, x, y)
| Parameter | Type | Description |
|---|---|---|
y_sigma |
array-like | Per-point y uncertainties |
x |
array-like | x-axis measurements |
y |
array-like | y-axis measurements |
| Method | Returns | Description |
|---|---|---|
.fit() |
(slope, intercept, slope_err, intercept_err) |
Weighted least-squares fit |
Mathematical background
Non-covariant error propagation:
$$ \sigma_f = \sqrt{\sum_{i} \left(\frac{\partial f}{\partial x_i}\right)^2 \sigma_i^2} $$
This assumes uncorrelated measurement variables. A covariance-aware version is planned for a future release.
Development
git clone https://github.com/ieepirzy/ieeLabTools
cd ieeLabTools
pip install -e ".[dev]"
pytest tests/ -v
Documentation
Full documentation with derivations and worked examples: Docs/Documentation.md
License
MIT — see LICENSE.
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