injury-summary-generator 1.1.0

A tool to generate summaries of injuries from PDF medical records

Injury Summary Generator

This project automates the process of creating a demand letter for a client based on medical records in PDF format. It extracts relevant information from medical records and generates a "Summary of Injuries" section in a table format.

Data Source

The ICD-10 codes used in this project are sourced from the Centers for Medicare & Medicaid Services (CMS) website. You can find the official ICD-10 code lists at:

https://www.cms.gov/medicare/coordination-benefits-recovery/overview/icd-code-lists

This authoritative source ensures that our project uses up-to-date and accurate ICD-10 codes for classifying diagnoses.

Features

• PDF Processing: Reads multiple PDF files containing medical records and extracts text.
• Information Extraction: Extracts key information such as visit dates, diagnoses, and page numbers.
• ICD-10 Code Determination: Determines appropriate ICD-10 codes for extracted diagnoses.
• PDF Generation: Creates a summary PDF with a formatted table of extracted information.

Installation

You can install the Injury Summary Generator using pip:

pip install injury-summary-generator

Usage

After installation, you can run the Injury Summary Generator using the following command:

injury-summary-generator <input_folder> <output_folder>

Where:

• <input_folder> is the path to the folder containing the medical record PDF files.
• <output_folder> is the path where the output summary PDF will be saved.

To check the version of the installed package, use:

injury-summary-generator --version

Project Structure

• generate_summary_of_injuries/: Main package directory.
  • __init__.py: Package initialization file.
  • _metadata.py: Package metadata.
  • main.py: Entry point for the command-line interface.
  • processor.py: Main processing logic.
  • pdf_reader.py: Handles reading PDF files and extracting text.
  • date_extractor.py: Extracts dates from text.
  • diagnosis_extractor.py: Extracts diagnoses from text.
  • icd_code_determiner.py: Determines ICD-10 codes based on diagnoses.
  • pdf_creator.py: Creates the final summary PDF.
  • data/: Contains data files used by the project.
    • icd10_codes.csv: CSV file containing ICD-10 codes and descriptions.
• tests/: Contains unit tests for the project.
• setup.py and setup.cfg: Configuration files for packaging and distribution.
• requirements.in and requirements.txt: Lists Python dependencies for the project.
• MANIFEST.in: Specifies additional files to include in the package.
• README.md: Provides information about the project and how to use it.
• .gitignore: Specifies files and directories to be ignored by Git.

Development

To set up the development environment:

1. Clone the repository: git clone https://github.com/yourusername/injury-summary-generator.git
2. Create a virtual environment: python -m venv venv
3. Activate the virtual environment:
   • On Windows: venv\Scripts\activate
   • On macOS and Linux: source venv/bin/activate
4. Install dependencies: pip install -r requirements.txt
5. Install the package in editable mode: pip install -e .

Testing

To run the tests, use the following command:

pytest

Contributing

Contributions to this project are welcome. Please follow these steps:

1. Fork the repository.
2. Create a new branch (git checkout -b feature/your-feature-name).
3. Make your changes and commit them (git commit -am 'Add some feature').
4. Push to the branch (git push origin feature/your-feature-name).
5. Create a new Pull Request.

Releasing

To create a new release:

1. Update the version number in setup.py.
2. Create a new tag with the version number: git tag v1.0.0
3. Push the tag to GitHub: git push origin v1.0.0
4. Create a new release on GitHub, describing the changes and new features.
5. Build and upload the package to PyPI:

   python setup.py sdist bdist_wheel
   twine upload dist/*
   

License

This project is licensed under the MIT License - see the LICENSE file for details.