JSON schema and validation for INSDC benchmarking results
Project description
INSDC Benchmarking Schema
Python package providing JSON schema and validation for INSDC benchmarking results.
Installation
pip install insdc-benchmarking-schema
Quick Start
from insdc_benchmarking_schema import BenchmarkResult
result = BenchmarkResult(
timestamp="2025-01-15T14:30:00Z",
site="nci",
protocol="globus",
repository="ENA",
dataset_id="SRR12345678",
duration_sec=42.7,
file_size_bytes=104857600,
average_speed_mbps=950.5,
status="success",
checksum_md5="d41d8cd98f00b204e9800998ecf8427e"
)
print(result.model_dump_json(indent=2))
See full documentation in the repository.
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