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iscc (in silico cancer center) is a multi-modal tumor evolution data simulator. It grows one selection-driven, spatially-structured tumor, optionally treats it, samples it, and generates single-cell and bulk DNA, RNA, and spatial data, down to sequencing reads. Because every run knows the true clones, mutations, copy numbers, cell states, spatial niches, and lineages, iscc provides a realistic ground truth for benchmarking computational tumor evolution methods.

Installation

pip install insilico-cancer-center

Metadata

Release files for insilico-cancer-center 0.3.0

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Source distribution for insilico-cancer-center 0.3.0
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insilico_cancer_center-0.3.0-py3-none-any.whl Python 3 none any Details for insilico_cancer_center-0.3.0-py3-none-any.whl

Total release size: 746.3 kB

Release files / insilico_cancer_center-0.3.0.tar.gz

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