This is a pre-production deployment of Warehouse, however changes made here WILL affect the production instance of PyPI.
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Project Description

IPyMOL

IPyMOL allows you to control PyMOL sessions via IPython. This tool is ideal for situations where you’d like to present your work neatly in a Jupyter Notebook or conveniently prototype PyMOL scripts.

Before You Begin

Please ensure that PyMOL is in your $PATH as pymol or you can start PyMOL in server mode:

$ pymol -R #-cKRQ to run it without a GUI

Installation

pip install ipymol

Example Usage

You can fire up an IPython or IPython Notebook session and start using IPyMOL. For example:

from ipymol import viewer as pymol
pymol.start()   # Start PyMOL RPC server
pymol.fetch('3odu') # Fetch PDB
pymol.show_as('cartoon') # Show as cartoon
pymol.bg_color('white') # Set background color to white
pymol.display() # Show current display

This series of commands will define a variable pymol of class MolViewer, which can pass commands to PyMOL, and then create an image of PDBID:3odu in your IPython session. Additional commands can be invoked via pymol.do("[ENTER YOUR COMMAND HERE]").

Here’s an example notebook with more information.

Enjoy!

Release History

Release History

0.5

This version

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

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0.4

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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0.3

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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Download Files

Download Files

TODO: Brief introduction on what you do with files - including link to relevant help section.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
ipymol-0.5-py3-none-any.whl (5.0 kB) Copy SHA256 Checksum SHA256 py3 Wheel Dec 1, 2016
ipymol-0.5.tar.gz (3.2 kB) Copy SHA256 Checksum SHA256 Source Dec 1, 2016

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