Wrapper for embedded python on InterSystems IRIS
Project description
iris-embedded-python-wrapper
iris-embedded-python-wrapper provides a stable import iris facade for
InterSystems IRIS Python projects.
It lets the same application code work across the common IRIS Python runtimes:
- IRIS embedded Python launched by IRIS, for example
iris python irisoriris session irisfollowed by:py - regular
python3using an installed IRIS embedded Python runtime - remote/native connections through the official
intersystems-irispythonSDK
The wrapper keeps iris.cls(...), iris.connect(...), and iris.dbapi
available from one package while making the active runtime explicit through
iris.runtime.
More details about embedded Python in IRIS are available in the IRIS documentation.
What this project brings
Without this wrapper, Python code often has to care about where it is running:
- the embedded
irismodule is available inside an IRIS Python kernel, but not automatically from a normalpython3process - the official remote SDK also exposes an
irispackage, so local embedded, embedded-kernel, and remote/native imports can shadow each other iris.cls(...)and DB-API connection behavior differ between embedded and remote execution- Unix dynamic library setup must happen before Python starts, while Windows needs DLL directory registration
- embedded
%SQL.Statementand remote DB-API can disagree on IRIS boundary values such as SQLNULLand empty string
This package gives you:
- a unified
iris.runtimestate model (auto,embedded,native) iris.connect(path=<iris_install_dir>)to enable an embedded-local runtime withoutIRISINSTALLDIR- an
iris.dbapifacade that can use embedded SQL or the official native DB-API driver iris.dbapi.connect(path=<iris_install_dir>)to configure embedded-local mode and return a DB-API connection in one call- native object proxy support through
iris.cls(...)when a remote IRIS handle is bound - consistent embedded DB-API normalization for SQL
NULLand empty strings - automatic Windows
os.add_dll_directory(...)handling for IRIS libraries - Docker and GitHub test flows that run against the official IRIS community image without writing into the mounted source tree
Runtime modes
| Runtime | How it is used | Main entry points |
|---|---|---|
embedded-kernel |
Python is started by IRIS | iris python iris, iris session iris then :py |
embedded-local |
normal python3 loads IRIS embedded libraries |
IRISINSTALLDIR, loader path, iris.connect(path=...), or iris.dbapi.connect(path=...) |
native-remote |
Python connects to a running IRIS instance | iris.connect(...), iris.runtime.configure(...), iris.dbapi.connect(mode="native") |
unavailable |
no embedded runtime or native binding is available | configure a runtime before using IRIS APIs |
Newer features
iris.connect(path=...)can configure the embedded runtime on demand when the IRIS install directory is known butIRISINSTALLDIRis not set.iris.dbapi.connect(path=...)uses the same embedded runtime configuration path and returns an embedded DB-API connection.- Explicit
path=...loading validates thatpythonintcame from that IRIS installation and reports Unix loader-path failures with the requiredLD_LIBRARY_PATHorDYLD_LIBRARY_PATHsetup. iris.runtimeis the single source of truth for runtime state and backend bindings.iris.dbapi.connect(mode="auto")chooses embedded or native DB-API based on explicit arguments and runtime state.- Native driver loading prefers the official
intersystems-irispythonSDK and only falls back to the community compatibility module when the official SDK is unavailable. - Unit tests isolate filesystem/CPF behavior from real
iris merge; real IRIS kernel and:pychecks live in e2e tests.
Prerequisites
To use embedded-local or embedded-kernel mode, you need an InterSystems IRIS installation (more details can be found here).
For remote/native mode, you need a running IRIS instance reachable by the official native driver.
For embedded access from outside an IRIS kernel, configure Service Call-In and environment variables.
Configuration of Service Call-In
In the Management Portal, go to System Administration > Security > Services, select %Service_CallIn, and check the Service Enabled box.
More details can be found in the IRIS documentation
Environment Variables
Use the following environment variables as needed:
IRISINSTALLDIR: path to the IRIS installation directoryLD_LIBRARY_PATH: Linux loader path for IRIS shared librariesDYLD_LIBRARY_PATH: macOS loader path for IRIS shared libraries, where allowed by the Python launcherIRISUSERNAME: username for remote/native test connectionsIRISPASSWORD: password for remote/native test connectionsIRISNAMESPACE: namespace for remote/native test connections
IRISINSTALLDIR is enough for many wrapper-level checks, but embedded-local
execution from regular python3 on Unix also needs the loader path configured
before Python starts. iris.connect(path=...) can configure Python import paths
at runtime, but it cannot repair Unix dynamic loader resolution after the
process has already started. If pythonint is found but its dependent shared
libraries are not, the runtime error names the loader-path variable that must
include the IRIS bin directory. When embedded-local is configured through
IRISINSTALLDIR, ISC_PACKAGE_INSTALLDIR, or path=..., the wrapper also
emits a RuntimeWarning on Unix if that loader-path variable does not already
include the IRIS bin directory.
Linux and macOS
For Linux and macOS, set the environment variables as follows:
export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
# for macOS
export DYLD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$DYLD_LIBRARY_PATH
# for remote/native connection tests
export IRISUSERNAME=SuperUser
export IRISPASSWORD=<password>
export IRISNAMESPACE=USER
Windows
For Windows, set the IRIS install directory as follows:
set IRISINSTALLDIR=C:\path\to\iris
For Python 3.8 and newer, the wrapper automatically registers the IRIS bin
directory with os.add_dll_directory() when IRISINSTALLDIR is set. Update
PATH only when using older Python versions or external tools that need IRIS
DLLs:
set PATH=%IRISINSTALLDIR%\bin;%PATH%
Set the IRIS username, password, and namespace when using remote/native connections:
set IRISUSERNAME=SuperUser
set IRISPASSWORD=<password>
set IRISNAMESPACE=USER
PowerShell
For PowerShell, you can set the environment variables as follows:
$env:IRISINSTALLDIR="C:\path\to\iris"
$env:IRISUSERNAME="SuperUser"
$env:IRISPASSWORD="<password>"
$env:IRISNAMESPACE="USER"
Installation
pip install iris-embedded-python-wrapper
Usage
Use this package when you want one Python import path across embedded and remote IRIS code:
import irisand call IRIS classes withiris.cls(...)- inspect or force the active runtime with
iris.runtime - enable embedded-local mode with
iris.connect(path=...)oriris.dbapi.connect(path=...) - connect to remote IRIS through the official native driver
- use
iris.dbapifor embedded or native SQL access - bind or unbind a virtual environment to IRIS embedded Python with
bind_irisandunbind_iris
Basic embedded usage
Inside an IRIS embedded Python kernel, import iris exposes the embedded IRIS
APIs:
import iris
iris.system.Version.GetVersion()
Output:
'IRIS for UNIX (Apple Mac OS X for x86-64) 2024.3 (Build 217U) Thu Nov 14 2024 17:29:23 EST'
If the wrapper is imported where no embedded runtime or native connection is
available, IRIS APIs are not silently usable. Configure embedded mode with
IRISINSTALLDIR or iris.connect(path=...), or configure native mode with a
remote connection.
Unified runtime context
The wrapper now uses a unified runtime API through iris.runtime.
Embedded runtime
The wrapper can run in two embedded contexts:
embedded-kernel: Python is launched by IRIS, for example withiris python irisoriris session irisfollowed by:pyembedded-local: regularpython3loads the IRIS embedded Python libraries from an installed IRIS instance
In embedded-kernel, IRIS has already loaded the runtime. Set PYTHONPATH to
the project or installed package location when you need the wrapper instead of
the built-in iris module:
PYTHONPATH=/path/to/iris-embedded-python-wrapper iris python iris
For an interactive session:
PYTHONPATH=/path/to/iris-embedded-python-wrapper iris session iris
USER>:py
>>> import iris
>>> iris.runtime.get().state
'embedded-kernel'
In embedded-local, configure the IRIS install directory and loader path before
starting Python, or provide the install directory at runtime with
iris.connect(path=...) as described below.
Runtime model
iris.runtime.mode: selected policy (auto,embedded,native)iris.runtime.state: detected runtime (embedded-kernel,embedded-local,native-remote,unavailable)iris.runtime.embedded_available: whether embedded backend can be usediris.runtime.iris: currently bound native object API handle (optional)iris.runtime.dbapi: optional explicitly bound DB-API connection
Runtime control API
iris.runtime.get()iris.runtime.configure(mode="auto", install_dir=None, iris=None, dbapi=None, native_connection=None)iris.runtime.reset()
mode is optional in runtime.configure(...).
- If
iris,native_connection, ordbapiis provided, runtime infers native mode. - If no connection handle is provided, runtime stays in auto/embedded detection flow.
runtime.configure(...) also accepts an IRISConnection and auto-converts it to an IRIS handle via createIRIS(...) for iris.cls(...) routing.
Remote iris.cls(...): before and after
The official native API is explicit and low-level. Without the wrapper, remote code normally keeps an IRIS handle and calls helper methods for every class method, object method, property read, and property write:
import iris
conn = iris.connect("localhost", 1972, "USER", "SuperUser", "<password>")
db = iris.createIRIS(conn)
req = db.classMethodValue("Ens.StringRequest", "%New")
db.set(req, "StringValue", "hello")
value = db.get(req, "StringValue")
db.invoke(req, "SomeInstanceMethod")
result = db.classMethodValue("MyApp.Service", "SomeClassMethod", value)
# Some SDK versions also expose invokeClassMethod(...).
same_result = db.invokeClassMethod("MyApp.Service", "SomeClassMethod", value)
With this wrapper, bind the native connection once and use the same
iris.cls(...) shape you would use in embedded Python. The proxy maps a leading
underscore to %, so _New() calls %New.
import iris
conn = iris.connect("localhost", 1972, "USER", "SuperUser", "<password>")
iris.runtime.configure(native_connection=conn)
req = iris.cls("Ens.StringRequest")._New()
req.StringValue = "hello"
value = req.StringValue
req.SomeInstanceMethod()
result = iris.cls("MyApp.Service").SomeClassMethod(value)
This keeps remote/native code close to embedded code and removes most direct
use of classMethodValue(...), invokeClassMethod(...), invoke(...),
get(...), and set(...) from application code.
Examples
Force native object API routing:
import iris
conn = iris.connect("localhost", 1972, "USER", "SuperUser", "<password>")
iris.runtime.configure(mode="native", native_connection=conn)
obj = iris.cls("Ens.StringRequest")._New()
Native routing with inferred mode and auto-conversion from IRISConnection:
import iris
conn = iris.connect("localhost", 1972, "USER", "SuperUser", "<password>")
iris.runtime.configure(native_connection=conn)
obj = iris.cls("Ens.StringRequest")._New()
Force embedded routing:
import iris
iris.runtime.configure(mode="embedded")
obj = iris.cls("Ens.StringRequest")._New()
Enable embedded routing with an explicit IRIS installation directory:
import iris
iris.connect(path="/opt/iris")
obj = iris.cls("Ens.StringRequest")._New()
This is useful when IRISINSTALLDIR is not set. On Linux and macOS, the
native library path still needs to be configured before Python starts as shown
in the environment setup section; path=... configures the wrapper, but it
cannot change Unix dynamic loader resolution for already-started processes.
The path must point to an IRIS installation directory with bin and
lib/python subdirectories; invalid paths fail before the wrapper mutates
Python import paths or loader paths. For explicit path=..., the wrapper also
removes stale pythonint modules for the import attempt and verifies that the
loaded pythonint.__file__ is under that installation's bin or lib/python
directory.
iris.connect(path=...) returns the runtime context. If the loaded embedded
backend does not expose a callable connect, the wrapper emits a
RuntimeWarning; use iris.dbapi.connect(path=...) when you want a DB-API
connection in one call.
Reset to automatic detection:
import iris
iris.runtime.reset()
DB-API (iris.dbapi)
The wrapper exposes a DB-API facade at iris.dbapi.
Supported subset
iris.dbapi.connect(...)- Connection:
cursor(),close(),commit(),rollback() - Cursor:
execute(),fetchone(),fetchmany(),fetchall(), iteration,close() - PEP 249 metadata:
apilevel,threadsafety,paramstyle - PEP 249 exceptions:
Error,InterfaceError,OperationalError, and related subclasses
Value normalization
For the embedded %SQL.Statement backend, the wrapper normalizes IRIS SQL/ObjectScript string boundary values to Python values so embedded and remote DB-API behave the same way:
- SQL
NULLis returned as PythonNone - SQL empty string is returned as Python
"" - Python
Nonepassed as a parameter remains SQLNULL - Python
""passed as a parameter is written as an SQL empty string, not SQLNULL
This normalization is limited to the embedded DB-API path. Native/remote DB-API values are returned by the official driver.
For the native object proxy path (iris.cls(...) with iris.runtime configured for native mode), the wrapper also normalizes declared scalar string properties:
%String/%RawStringscalar properties that come back asNonefrom the native proxy are returned as Python""- non-string properties are left unchanged
- collection-valued properties are left unchanged
- arbitrary method return values are left unchanged
Connect modes
iris.dbapi.connect() accepts mode="auto" | "embedded" | "native".
mode="embedded": forces embedded SQL backend via%SQL.Statementmode="native": forces native DB-API backend via the official moduleiris.dbapimode="auto":- if explicit remote arguments are provided (
hostname,port,namespace, etc.), uses native - if
iris.runtime.dbapiis already bound, reuses that DB-API connection - otherwise uses embedded (
%SQL.Statement) only when runtime policy is not native - if
iris.runtimeis configured for native mode without a bound DB-API connection, raises an error instead of silently falling back to embedded - raises an error if embedded runtime is not available
- if explicit remote arguments are provided (
Native resolution uses the official module path iris.dbapi (not intersystems_iris.dbapi).
mode is optional for DB-API.
- With explicit remote arguments (
hostname,port,namespace,username,password, etc.), DB-API infers native. - With
path=..., DB-API configures embedded-local runtime and returns an embedded DB-API connection.modemust beautoorembedded. - With
iris.runtime.configure(dbapi=conn), DB-API auto mode reuses the bound native connection. - Without remote arguments or a bound runtime DB-API connection, DB-API auto mode uses embedded unless
iris.runtimeis explicitly in native mode.
iris.connect(path=...) and iris.dbapi.connect(path=...) share the same
embedded runtime configuration behavior, but return different things:
iris.connect(path=...)returns theRuntimeContextiris.dbapi.connect(path=...)returns a DB-API connection
iris.dbapi.connect(path=...) accepts embedded DB-API options such as
namespace=... and isolation_level=.... It rejects native mode and native
connection arguments such as hostname, port, username, and password.
The path is validated with the same rules as iris.connect(path=...).
Examples
Embedded mode:
import iris
conn = iris.dbapi.connect()
cur = conn.cursor()
cur.execute("SELECT Name FROM Sample.Person")
rows = cur.fetchall()
cur.close()
conn.close()
Embedded-local mode with an explicit IRIS installation directory:
import iris
conn = iris.dbapi.connect(path="/opt/iris", namespace="USER")
cur = conn.cursor()
cur.execute("SELECT 1")
print(cur.fetchone())
Native mode:
import iris
conn = iris.dbapi.connect(
mode="native",
hostname="localhost",
port=1972,
namespace="USER",
username="SuperUser",
password="<password>",
)
cur = conn.cursor()
cur.execute("SELECT 1")
print(cur.fetchone())
Auto mode with explicit remote arguments (routes to native):
import iris
conn = iris.dbapi.connect(
hostname="localhost",
port=1972,
namespace="USER",
username="SuperUser",
password="<password>",
)
Auto mode with a runtime-bound native DB-API connection:
import iris
conn = iris.dbapi.connect(
mode="native",
hostname="localhost",
port=1972,
namespace="USER",
username="SuperUser",
password="<password>",
)
iris.runtime.configure(dbapi=conn)
same_conn = iris.dbapi.connect(mode="auto")
assert same_conn is conn
Runtime independence
iris.dbapi.connect() is independent from iris.runtime by default.
Calling iris.dbapi.connect(...) does not auto-bind a connection into iris.runtime.dbapi.
If you need runtime-managed DB-API binding, bind it explicitly with iris.runtime.configure(dbapi=conn).
Once bound, iris.dbapi.connect(mode="auto") reuses that connection instead of creating a new one.
Bind a virtual environment to embedded Python in IRIS
You can bind a Python virtual environment into the IRIS embedded Python configuration:
bind_iris
Output:
(.venv) demo ‹master*›$ bind_iris
INFO:iris_utils._find_libpython:Created backup at /opt/intersystems/iris/iris.cpf.fa76423a7b924eb085911690c8266129
INFO:iris_utils._find_libpython:Created merge file at /opt/intersystems/iris/iris.cpf.python_merge
up IRIS 2024.3.0.217.0 1972 /opt/intersystems/iris
Username: SuperUser
Password: ***
IRIS Merge of /opt/intersystems/iris/iris.cpf.python_merge into /opt/intersystems/iris/iris.cpf
IRIS Merge completed successfully
INFO:iris_utils._find_libpython:PythonRuntimeLibrary path set to /usr/local/Cellar/python@3.11/3.11.10/Frameworks/Python.framework/Versions/3.11/Python
INFO:iris_utils._find_libpython:PythonPath set to /demo/.venv/lib/python3.11/site-packages
INFO:iris_utils._find_libpython:PythonRuntimeLibraryVersion set to 3.11
You may need IRIS administrator credentials to bind the virtual environment to embedded Python in IRIS.
On Windows, restart IRIS after changing the embedded Python configuration.
Unbind a virtual environment from embedded Python in IRIS
unbind_iris
Output:
(.venv) demo ‹master*›$ unbind_iris
INFO:iris_utils._find_libpython:Created merge file at /opt/intersystems/iris/iris.cpf.python_merge
up IRIS 2024.3.0.217.0 1972 /opt/intersystems/iris
Username: SuperUser
Password: ***
IRIS Merge of /opt/intersystems/iris/iris.cpf.python_merge into /opt/intersystems/iris/iris.cpf
IRIS Merge completed successfully
INFO:iris_utils._find_libpython:PythonRuntimeLibrary path set to /usr/local/Cellar/python@3.11/3.11.10/Frameworks/Python.framework/Versions/3.11/Python
INFO:iris_utils._find_libpython:PythonPath set to /Other/.venv/lib/python3.11/site-packages
INFO:iris_utils._find_libpython:PythonRuntimeLibraryVersion set to 3.11
Running tests
Local .venv
For pure unit tests, use the project virtual environment and keep CPF merge tests on temporary files:
python3 -m venv .venv
. .venv/bin/activate
python -m pip install --upgrade pip setuptools wheel
python -m pip install -e . pytest
env -u ISC_CPF_MERGE_FILE python -m pytest tests -q
Embedded-local e2e tests from python3 also need an IRIS installation and the
platform loader path configured before Python starts:
export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
python -m pytest tests/iris/test_dbapi_e2e.py -q
On macOS use DYLD_LIBRARY_PATH where your shell and Python launcher allow it.
On Windows, the wrapper registers the IRIS bin directory with
os.add_dll_directory() when IRISINSTALLDIR is set.
Docker
Run the test suite in Docker with the vanilla official InterSystems IRIS community image:
./scripts/test-docker.sh
Pass any pytest selector or option after the script name:
./scripts/test-docker.sh tests/iris/test_dbapi_embedded.py -q
scripts/test-docker.sh starts docker-compose-test-preview.yml, waits for
IRIS, unlocks the default test passwords, and then delegates pytest execution to
scripts/run-pytest-in-iris.sh. The in-container runner is the single source of
truth for GitHub Actions and local Docker runs.
The container test flow is source-based:
- the repository is mounted at
/irisdev/appread-only PYTHONPATH=/irisdev/appexposes the working tree- the test virtual environment is created under
/tmp - pytest bytecode/cache writes are disabled
ISC_CPF_MERGE_FILEis unset before pytest so tests cannot rewrite the repo merge file
By default IRIS_E2E_MODES=embedded,remote, so remote DB-API e2e tests run and
the embedded runtime plus embedded DB-API SQL are required from python3.
To test another IRIS image tag:
IRIS_IMAGE_TAG=latest-preview ./scripts/test-docker.sh
Troubleshooting
You may encounter the following error, here is how to fix them.
No module named 'pythonint'
This usually means the wrapper cannot find the IRIS embedded Python extension.
Check that IRISINSTALLDIR or path=... points to the IRIS installation
directory, not a parent directory, and that it contains both bin and
lib/python.
If the error mentions IRIS shared libraries, configure the platform loader path before Python starts:
export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
# macOS
export DYLD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$DYLD_LIBRARY_PATH
IRIS_ACCESSDENIED (-15)
This can occur when Service Call-In is not enabled. Make sure
%Service_CallIn is enabled.
IRIS_ATTACH (-21)
This can occur when the user is not the same as the iris owner. Make sure that the user is the same as the iris owner.
irisbuiltins.SQLError: ddtab+82^%qaqpsq
This error can occur when IRIS dependent libraries are not visible to the
dynamic loader. Prefer setting LD_LIBRARY_PATH on Linux or DYLD_LIBRARY_PATH
on macOS before Python starts, instead of copying IRIS libraries into the
Python installation:
export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
# macOS
export DYLD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$DYLD_LIBRARY_PATH
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