IRIS Vector RAG

RAG (Retrieval-Augmented Generation) pipelines powered by InterSystems IRIS vector search.

Author: Thomas Dyar (thomas.dyar@intersystems.com)

Quick Start

# 1. Clone and install
git clone https://github.com/intersystems-community/iris-vector-rag.git
cd iris-vector-rag
pip install -e .

# 2. Start IRIS
docker compose up -d

# 3. Configure
cp .env.example .env
# Edit .env — add your OPENAI_API_KEY

# 4. Query
python -c "
from iris_vector_rag import create_pipeline
from iris_vector_rag.core.models import Document

pipeline = create_pipeline('basic')
pipeline.load_documents(documents=[
    Document(page_content='RAG combines retrieval with generation for accurate AI.', metadata={'source': 'intro.pdf'}),
    Document(page_content='Vector search finds similar content using embeddings.', metadata={'source': 'vectors.pdf'}),
])
result = pipeline.query('What is RAG?', top_k=5, generate_answer=True)
print(result['answer'])
"

Pipelines

All pipelines share the same interface — switch with one line:

from iris_vector_rag import create_pipeline

pipeline = create_pipeline('basic')           # Vector similarity search
pipeline = create_pipeline('basic_rerank')    # + cross-encoder reranking
pipeline = create_pipeline('crag')            # + self-correction + web fallback
pipeline = create_pipeline('graphrag')        # + knowledge graph + entity reasoning
pipeline = create_pipeline('multi_query_rrf') # + query expansion + rank fusion
pipeline = create_pipeline('pylate_colbert')  # + ColBERT late interaction

Pipeline	Method	Best For
`basic`	Vector similarity	General Q&A, getting started
`basic_rerank`	Vector + reranking	Higher accuracy, medical/legal
`crag`	Vector + evaluation + web	Fact-checking, current events
`graphrag`	Vector + text + graph + RRF	Complex relationships, research
`multi_query_rrf`	Query expansion + fusion	Comprehensive coverage
`pylate_colbert`	ColBERT embeddings	Fine-grained matching

Response Format

All pipelines return the same structure (LangChain/RAGAS compatible):

result = pipeline.query("What is diabetes?", top_k=5)

result["answer"]                # LLM-generated answer
result["retrieved_documents"]   # List[Document]
result["contexts"]              # List[str] — for RAGAS evaluation
result["sources"]               # Source citations
result["metadata"]              # Timing, pipeline type, method used

Configuration

Environment variables (loaded automatically from .env):

OPENAI_API_KEY=sk-...          # Required for answer generation
IRIS_HOST=localhost             # IRIS SuperServer host
IRIS_PORT=1972                  # IRIS SuperServer port
IRIS_NAMESPACE=USER             # IRIS namespace
IRIS_USERNAME=_SYSTEM           # IRIS username
IRIS_PASSWORD=SYS               # IRIS password

Evaluate with RAGAS

Compare pipelines side-by-side using real RAGAS metrics:

python examples/compare_pipelines.py --pipelines basic,basic_rerank

Or in code:

from iris_vector_rag import create_pipeline
from ragas import evaluate, EvaluationDataset, SingleTurnSample
from ragas.metrics import faithfulness, context_precision, context_recall

pipeline = create_pipeline('basic')
pipeline.load_documents(documents=docs)
result = pipeline.query("What is diabetes?", top_k=3, generate_answer=True)

sample = SingleTurnSample(
    user_input="What is diabetes?",
    response=result["answer"],
    retrieved_contexts=result["contexts"],
    reference="Diabetes is a chronic condition...",
)
scores = evaluate(EvaluationDataset(samples=[sample]),
                  metrics=[faithfulness, context_precision, context_recall])

Optional Extras

pip install iris-vector-rag[colbert]     # ColBERT/PyLate support
pip install iris-vector-rag[dspy]        # DSPy prompt optimization
pip install iris-vector-rag[evaluation]  # RAGAS evaluation framework
pip install iris-vector-rag[api]         # REST API server (FastAPI + Redis)

MCP Server

The MCP server is implemented and available at iris_vector_rag/mcp/. It exposes 8 tools (rag_basic, rag_basic_rerank, rag_crag, rag_graphrag, rag_pylate_colbert, rag_iris_global_graphrag, rag_health_check, rag_metrics) over the Model Context Protocol.

pip install iris-vector-rag[mcp]
python -m iris_vector_rag.mcp start       # start server
python -m iris_vector_rag.mcp list-tools  # list available tools
python -m iris_vector_rag.mcp status      # server status

For MCP tool orchestration across IRIS packages, use iris-agentic-dev.

Development

pip install -e ".[dspy,evaluation]"
pytest tests/unit/                    # Fast, no IRIS needed
pytest tests/unit/ tests/contract/    # Full suite, needs IRIS running

Architecture

iris_vector_rag/
├── pipelines/      # 6 RAG implementations (basic, crag, graphrag, etc.)
├── core/           # Base classes, models, connection management
├── storage/        # IRIS vector store, schema management
├── embeddings/     # Embedding generation and caching
├── services/       # Entity extraction, storage adapters
├── config/         # Configuration management
├── mcp/            # MCP server implementation
└── api/            # Optional REST API (FastAPI)

License

MIT

Metadata

Release files for iris-vector-rag 0.14.0

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Publishing platform: GitHub Actions
Publishing repository: github.com/intersystems-community/iris-vector-rag
Publishing commit: github.com/intersystems-community/iris-vector-rag/tree/ff585d370231745b09480936183bc77f6dd11634

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Publishing configuration: github.com/intersystems-community/iris-vector-rag/blob/ff585d370231745b09480936183bc77f6dd11634/.github/workflows/release.yml
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