Tools for working with JAFFA fusion gene detection
Project description
JaffaTools
A Python toolkit for JAFFA fusion gene detection
Instructions
- Filter FASTQ files: Filter FASTQ files based on the reads in the BAM file and keep only matching reads.
- Run JAFFA: Encapsulates the running function of the JAFFA fusion gene detection process.
- Add NB:Z tags: Extract NB:Z tags from the BAM file and add them to the JAFFA result CSV file.
Install
pip install jaffatools
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Source Distribution
jaffatools-0.3.0.tar.gz
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