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This release is a pre-release and may not be stable for production use.


This project has now been incorporated into GPJax.

JaxUtils

CircleCI

JaxUtils provides utility functions for the JaxGaussianProcesses ecosystem.

Contents

PyTree

Overview

jaxutils.PyTree is a mixin class for registering a python class as a JAX PyTree. You would define your Python class as follows.

class MyClass(jaxutils.PyTree):
    ...

Example

import jaxutils

from jaxtyping import Float, Array

class Line(jaxutils.PyTree):
    def __init__(self, gradient: Float[Array, "1"], intercept: Float[Array, "1"]) -> None
        self.gradient = gradient
        self.intercept = intercept

    def y(self, x: Float[Array, "N"]) -> Float[Array, "N"]
        return x * self.gradient + self.intercept

Dataset

Overview

jaxutils.Dataset is a datset abstraction. In future, we wish to extend this to a heterotopic and isotopic data abstraction.

Example

import jaxutils
import jax.numpy as jnp

# Inputs
X = jnp.array([[1.0, 2.0], [3.0, 4.0], [5.0, 6.0]])

# Outputs
y = jnp.array([[7.0], [8.0], [9.0]])

# Datset
D = jaxutils.Dataset(X=X, y=y)

print(f'The number of datapoints is {D.n}')
print(f'The input dimension is {D.in_dim}')
print(f'The output dimension is {D.out_dim}')
print(f'The input data is {D.X}')
print(f'The output data is {D.y}')
print(f'The data is supervised {D.is_supervised()}')
print(f'The data is unsupervised {D.is_unsupervised()}')
The number of datapoints is 3
The input dimension is 2
The output dimension is 1
The input data is [[1. 2.]
 [3. 4.]
 [5. 6.]]
The output data is [[7.]
 [8.]
 [9.]]
The data is supervised True
The data is unsupervised False

You can also add dataset together to concatenate them.

# New inputs
X_new = jnp.array([[1.5, 2.5], [3.5, 4.5], [5.5, 6.5]])

# New outputs
y_new = jnp.array([[7.0], [8.0], [9.0]])

# New dataset
D_new = jaxutils.Dataset(X=X_new, y=y_new)

# Concatenate the two datasets
D = D + D_new

print(f'The number of datapoints is {D.n}')
print(f'The input dimension is {D.in_dim}')
print(f'The output dimension is {D.out_dim}')
print(f'The input data is {D.X}')
print(f'The output data is {D.y}')
print(f'The data is supervised {D.is_supervised()}')
print(f'The data is unsupervised {D.is_unsupervised()}')
The number of datapoints is 6
The input dimension is 2
The output dimension is 1
The input data is [[1.  2. ]
 [3.  4. ]
 [5.  6. ]
 [1.5 2.5]
 [3.5 4.5]
 [5.5 6.5]]
The output data is [[7.]
 [8.]
 [9.]
 [7.]
 [8.]
 [9.]]
The data is supervised True
The data is unsupervised False

Metadata

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