jiboia gpu is a python package for automatically normalizing DataFrames and optimizing types efficiently.
Project description
jiboia-gpu
jiboia-gpu is a Python library designed to normalize data and optimize data types of a DataFrame efficiently using NVIDIA GPUs through the RAPIDS ecosystem.
Requirements
- NVIDIA GPU with CUDA support (CUDA 12+ recommended)
- Compatible cuDF version (>=25.8)
- Python >= 3.9
By Lucas Muffato 🇧🇷
Key Features
String Normalization
- Trims leading and trailing spaces.
- Removes extra whitespace.
- Detects data inconsistencies (e.g., numeric columns containing strings).
Numeric Conversion**
- Converts numeric strings and floats ending with
.0into integers (int8,int16,int32, …). - Optimizes numeric types for minimal memory usage.
- Recognizes many numeric formats, including:
"0.1","10",".0452","1000.00","0,1",",50","1000.000,00","1,1","10000","5e6","2.5e-2","0e1",".3e-2" - Categories of numeric recognition:
- Standard integers and floats:
"10","0.1","10000","1000.00" - Floats without leading zero:
".0452",".3e-2" - Scientific notation:
"5e6","2.5e-2","0e1" - European-style decimals:
"0,1",",50","1000.000,00" - False floats converted to integers:
"1000.00","0.0","1.0"
- Standard integers and floats:
Date/Time Conversion
- Parses strings representing dates in multiple formats:
yyyy?mm?dd,dd?mm?yyyy,yyyymmdd,dd?mm?yy→datetime. - Converts time strings like
hhmm UTC,hh:mm:ss,hh:mm:ss.s→timedelta.
Null Standardization
- Converts various null representations to
cudf.NA.
Automatic CSV Detection
- Detects the correct delimiter.
- Detects file encoding automatically.
Memory Optimization
- Provides memory usage information for DataFrames.
- Automatically converts columns to the most memory-efficient types.
Test coverage with pytest
- ✅ 100% in Numeric Normalization.
- ✅ 100% in String Normalization.
Table of Contents
Usage
DataFrame Normalization
from jiboia_gpu import jiboia_gpu as jb
jb.df.normalize(df) # Normalize the entire DataFrame
jb.df.cudf_size_info(df) # Show RAM and VRAM memory usage
Numeric Normalization
jb.num.normalize(df, column_name) # Normalize numeric columns
Date and Time Normalization
jb.dt.normalize(df, column_name) # Convert strings to datetime
jb.time.normalize(df, column_name) # Convert strings to timedelta
Null Normalization
jb.null.normalize(df, column_name) # Convert null values to cudf.NA
String Normalization
jb.str.normalize(df, column_name) # Remove extra spaces and create categories when appropriate
Time Normalization
jb.time.normalize(df, column_name) # Convert time strings to timedelta
Boolean Normalization
jb.bool.normalize(df, column_name) # Convert values to boolean
Automatic CSV Reading
jb.csv.read_files(
folder_path="my_folder/",
start_part=1,
end_part=10
) # Read multiple CSV files automatically
Full Example
Below is a detailed example of creating a DataFrame with messy data and performing full normalization.
import jiboia_gpu as jb
import cudf
```python
from jiboia-gpu import jiboia_gpu as jb
# ---- Creating a DataFrame with Mixed Dirty Data --- #
# Strings with multiple spaces, at the beginning and end
col_str = "col_str"
col_str_val = [
"Surucuçu",
"Cobra Cipó",
"King Cobra",
"Jararacuçu",
"NA",
" Jiboia",
" Coral Verdadeira ",
"Jararaca ",
"Surucucu",
"NA",
None,
"solid snake",
"null",
"unknown",
"Sea Snake ",
]
# Numbers in string with varied shapes
col_number_str = "col_number_str"
col_number_str_val = [
"1",
"0.1",
"NA",
".1",
"0,1",
",50",
"1000.000,00",
"1,1",
"5e6",
"2.5e-2",
"0e1",
"unknown",
None,
"0e1",
".3e-2",
]
# Integers in string with varied shapes
col_number_false_float_str = "col_number_false_float_str"
col_number_false_float_str_val = [
"10",
".0",
"1000.00",
"0.0",
"100,00",
"1",
None,
"Na",
"10000",
"5e2",
"[1,2,3,4]",
"0e1",
None,
"10",
"1"
]
# Boolean data in string of varying form
col_bool = "col_bool"
col_bool_val = [
'YES',
'No',
None,
'invalid',
'YES',
'No',
None,
'YEs',
'invalido',
'yes',
'NA',
'on',
'off',
None,
'on'
]
# Date data in string and in various formats
col_date = "col_date"
col_date_val = [
'15.06.2018',
'28/01/1990',
None,
'invalid',
'1988 02 08',
'20211212',
'01-02-2024',
'2023/12/20',
'20234550',
'2023-12-12',
'8-2-86',
'8-12-25',
'12-12-12',
'08-12-25',
None
]
# Datetime in string
col_datetime = "col_datetime"
col_datetime_val = [
"2025-01-01 01:10:10",
"2026-02-02 02:20:20",
"2027-03-03 03:30:30",
"2028-04-04 04:40:40",
"2029-05-05 05:50:50",
"2030-06-06 06:00:00",
"2031-07-07 07:10:10",
"invalid",
"2033-09-09 09:30:30",
"2034-10-10 10:40:40",
"2035-11-11 11:50:50",
"2036-12-12 12:00:00",
"2037-01-13 13:10:10",
"2038-02-14 14:20:20",
"2039-03-15 15:30:30",
]
# Time data in string and various forms
col_time = "col_time"
col_time_val = [
"0000UTC",
"0130UTC",
"NA",
"0540 UTC",
"1200UTC",
"00:21",
"1545UTC",
"invalid",
"2359UTC",
"null",
"23",
"20:23",
"10:12:12",
"07:32:12.1247",
None
]
# Strings that can be reduced into categories
col_cat = "col_cat"
col_cat_val = [
"constrictor snake",
"sea snake",
"poisonous snake",
"constrictor snake",
"invalid",
"poisonous snake",
"constrictor snake",
"sea snake",
"poisonous snake",
"constrictor snake",
None,
"poisonous snake",
"constrictor snake",
"sea snake",
"poisonous snake",
]
# Normalizing the dataframe
df: cudf.DataFrame = cudf.DataFrame({
col_str: col_str_val,
col_number_str: col_number_str_val,
col_number_false_float_str: col_number_false_float_str_val,
col_bool: col_bool_val,
col_date: col_date_val,
col_datetime: col_datetime_val,
col_time: col_time_val,
col_cat: col_cat_val
})
Done! all values null in column col_time converted to <NA>
Done! all duplicate and edge spaces have been removed in column col_cat
Done! all values null in column col_cat converted to <NA>
Done! column col_str converted to object
Done! column col_number_str converted to float64
Done! column col_number_false_float_str converted to int16
Done! column col_bool converted to bool
Done! column col_date converted to object
Done! column col_date converted to datetime64[s]
Done! column col_datetime converted to object
Done! column col_time converted to timedelta64[ns]
Done! column col_cat converted to object
Done! the column col_cat was converted to a category
print(df_normalized.dtypes)
# results:
col_str object
col_number_str float64
col_number_false_float_str int16
col_bool bool
col_date datetime64[s]
col_datetime datetime64[ns]
col_time timedelta64[ns]
col_cat category
dtype: object
Contribution Guidelines
- Typing is mandatory for all variables, attributes, and functions.
- Automated tests with
pytestare required for all contributions. - Project standards must be followed.
- Imports must be declared in alphabetical order.
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