Skip to main content

Joint modeling with automatic differentiation

Project description

📦 jmstate

jmstate is a Python package for multi-state nonlinear joint modeling.
It leverages PyTorch for automatic differentiation and vectorized computation, making it efficient and scalable. The package provides a flexible framework where you can use neural networks as regression and link functions, while still offering simpler built-in options like parametric baseline hazards.

With jmstate, you can model longitudinal data jointly with multi-state transitions (e.g. health progression), capture nonlinear effects, and perform inference in complex real-world settings.

👉 Full documentation, tutorials, and API reference are hosted here:
jmstate Documentation


✨ Features

  • Multi-State Joint Modeling
    Supports subjects moving through multiple states with transition intensities that depend on longitudinal trajectories and covariates.

  • Nonlinear Flexibility
    Use neural networks (or any PyTorch model) as regression or link functions.

  • Built-in Tools
    Includes default baseline hazards, regression, link functions, and analysis utilities.

  • Automatic Differentiation & GPU Support
    Powered by PyTorch for efficient gradient computation and vectorization.

  • Analysis & Visualization
    Tools for state occupancy probabilities, hazard estimation, and residual diagnostics.


🚀 Installation

pip install jmstate

📖 Learn More

For tutorials, API reference, visit the official site:
👉 jmstate Documentation

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

jmstate-0.1.1.tar.gz (44.2 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

jmstate-0.1.1-py3-none-any.whl (53.4 kB view details)

Uploaded Python 3

File details

Details for the file jmstate-0.1.1.tar.gz.

File metadata

  • Download URL: jmstate-0.1.1.tar.gz
  • Upload date:
  • Size: 44.2 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.13.7

File hashes

Hashes for jmstate-0.1.1.tar.gz
Algorithm Hash digest
SHA256 8c46722b56b754caeb3ca1602a28ab50e6d75fd47ae35b37d7786e1285b39233
MD5 ca80d54c3545f9c7ea5afe2f2829985f
BLAKE2b-256 3ada5a654e0658bccfda7c20a1461323a29043088f1a2526f44bf20843e8861b

See more details on using hashes here.

File details

Details for the file jmstate-0.1.1-py3-none-any.whl.

File metadata

  • Download URL: jmstate-0.1.1-py3-none-any.whl
  • Upload date:
  • Size: 53.4 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.13.7

File hashes

Hashes for jmstate-0.1.1-py3-none-any.whl
Algorithm Hash digest
SHA256 b7424a1c10aab41248d876997815adde33aedb1bc914385481da5276089fb76e
MD5 f058862b3d176b26108fb338ac5f5912
BLAKE2b-256 b60ebdf82374ce912245380710c6ba68b1758d43ec48155580be9438f45cfe4b

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page