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The python version of JSONGrapher with tools for creating JSONGrapher Records.

Project description

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JSONGrapher (python)

Imagine a world where a person can simply drag a datafile into a graphing utility and a plot will be made, including scientific units, and more plots can be dragged in from data from other sources (and other units) to compare all of the data together, in an interactive graph.

Create interactive plots just by drag-and-drop of JSON records. Share the json files for easy plotting by others. JSONGrapher automatically plots multiple records together, for comparison, and will automaticlaly convert units between records to plot the data sets together. For example, if one record is in kg/s and another in g/s, JSONGrapher will do the conversion automatically to plot both records together for comparison. Tools and examples are included for how to create JSON records.

To use python JSONGrapher, first install it using conda or pip:
pip install JSONGrapher[COMPLETE] or conda install conda-forge::jsongrapher
Alternatively, you can download the directory directly.

0. Plotting a JSON Record

To create an interactive plot, you just need one line of code! Then drag an example JSONGrapher record into the window to plot! Below are example 2D and 3D plots. Further below shows how easy it is to create your own json records.

import JSONGrapher; JSONGrapher.launch()

JSONGRapher window JSONGRapher plot

rainbow plot mesh3d plot scatter3d plot bubble plot

1. Preparing to Create a Record

The remainder of this landing page follows a json record tutorial example file which shows how to create graphable .json records. The records can then be plotted with python JSONGrapher or with jsongrapher.com

Let's create an example where we plot the height of a pear tree over several years.

x_label_including_units = "Time (years)"
y_label_including_units = "Height (m)"
time_in_years = [0, 1, 2, 3, 4]
tree_heights = [0, 0.42, 0.86, 1.19, 1.45]

2. Creating and Populating a New JSONGrapher Record

Record = JSONRecordCreator.create_new_JSONGrapherRecord()
Record.set_comments("Tree Growth Data collected from the US National Arboretum")
Record.set_datatype("Tree_Growth_Curve")
Record.set_x_axis_label_including_units(x_label_including_units)
Record.set_y_axis_label_including_units(y_label_including_units)
Record.add_data_series(series_name="pear tree growth", x_values=time_in_years, y_values=tree_heights, plot_type="scatter_spline")
Record.set_graph_title("Pear Tree Growth Versus Time")

3. Exporting to File

We can export a record to a .json file, which can then be used with JSONGrapher.

Record.export_to_json_file("ExampleFromTutorial.json")
Record.print_to_inspect()

Expected Output:

JSONGrapher Record exported to, ./ExampleFromTutorial.json
{
    "comments": "Tree Growth Data collected from the US National Arboretum",
    "datatype": "Tree_Growth_Curve",
    "data": [
        {
            "name": "pear tree growth",
            "x": [0, 1, 2, 3, 4],
            "y": [0, 0.42, 0.86, 1.19, 1.45],
            "type": "scatter",
            "line": { "shape": "spline" }
        }
    ],
    "layout": {
        "title": "Pear Tree Growth Versus Time",
        "xaxis": { "title": "Time (year)" },
        "yaxis": { "title": "Height (m)" }
    }
}

4. Plotting to Inspect

We can plot the data using Matplotlib and export the plot as a PNG file.

Record.plot_with_matplotlib()
Record.export_to_matplotlib_png("image_from_tutorial_matplotlib_fig")

We can create an interactive graph with python plotly:

Record.plot_with_plotly() #Try hovering your mouse over points after this command!

JSONGRapher record plotted using matplotlib

You can also see more examples: https://github.com/AdityaSavara/jsongrapher-py/tree/main/examples

Additionally, json records you send to others can be plotted by them at www.jsongrapher.com This 'see the plot using a browser' capability is intended to facilitate including JSONGrapher records in supporting information of scientific publications.

Contributing to JSONGrapher, Feature Suggestions, and Reporting Issues

These interactions should be through github at https://github.com/AdityaSavara/jsongrapher-py

To contribute to JSONGrapher, make a pull request with sufficient details about what issue you are trying to solve, and adequate commenting in your code to follow the logic. After that, be prepared for further communication if needed.

To suggest features, create a new issue under the issues tab.

To report issues, create a new issue under the issues tab.

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