An ultra-simple tool for manually culling micrographs, i.e. from cryo-EM data sets.
Installation
Create a conda environment for junker:
conda create -n env_junker python=3.7 source activate env_junker conda install numpy scipy skimage pyside2 pip install mrcz
Usage
Navigate to your target directory,
source activate env_junker junker
The tool will create PNGs from every .mrc, .mrcz file in the directory, and shows a GUI that you can use to navigate.
‘Spacebar’: moves the image to a ‘junk’ subdirectory.
‘Enter’: moves the image to a ‘salvage’ subdirectory.
‘Z’: undos the image move.
1 maintainer
Release files for junker 0.2.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| junker-0.2.0.tar.gz | 18.6 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| junker-0.2.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 38.8 kB
Release files / junker-0.2.0.tar.gz
| Download URL | junker-0.2.0.tar.gz |
|---|---|
| Size | 18.6 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
39ec28cf737a150280041f570b4da029a42661c577812bf1537b79fe900afe36
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
Python-urllib/3.7
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Release files / junker-0.2.0-py3-none-any.whl
| Download URL | junker-0.2.0-py3-none-any.whl |
|---|---|
| Size | 20.1 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
e4f407708a35d04883aa2b9a4211948bbac666ce0954c616d0780e13fabcbf5b
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
Python-urllib/3.7
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