Skip to main content

Interact with KEGG API

Project description

kegger

Light weight python tool for interacting with KEGG API.

Retrieve genes and KEGG pathway for your favorite organisms in the KEGG database

org = "eco"
kd = "00190"  # Oxidative phosphorylation - Escherichia coli K-12 MG1655
path_record = get_path(f"{org}{kd}")
path_dict = kegg_parser(path_record)
print(path_dict.get("GENE"))

['b0428', 'b0429', 'b0430', 'b0431', 'b0432', ...]

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

kegger-0.1.0.tar.gz (3.0 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

kegger-0.1.0-py3-none-any.whl (3.9 kB view details)

Uploaded Python 3

File details

Details for the file kegger-0.1.0.tar.gz.

File metadata

  • Download URL: kegger-0.1.0.tar.gz
  • Upload date:
  • Size: 3.0 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.7

File hashes

Hashes for kegger-0.1.0.tar.gz
Algorithm Hash digest
SHA256 b32c64177dd296ddeeec431d681388efcce734bb9b9d13e9f939c27617ec89dd
MD5 c2c607400d2c311092271607cefc8a42
BLAKE2b-256 bde27181b8e2bf6c4566d5dad4216a4ec4921a117b6f3508c92a34d4cfc65a80

See more details on using hashes here.

Provenance

The following attestation bundles were made for kegger-0.1.0.tar.gz:

Publisher: publish.yml on csaltikov/kegger

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file kegger-0.1.0-py3-none-any.whl.

File metadata

  • Download URL: kegger-0.1.0-py3-none-any.whl
  • Upload date:
  • Size: 3.9 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.7

File hashes

Hashes for kegger-0.1.0-py3-none-any.whl
Algorithm Hash digest
SHA256 448160791298adfe33646189ae02b05883af3b8b76c6432c634d8b12446b6a20
MD5 9ac4d22e77a2f73bea845ff322bca1d9
BLAKE2b-256 0ba365076afe472fc0ea47fedd9d76ff4978f9330a240a39ceae849184e3608d

See more details on using hashes here.

Provenance

The following attestation bundles were made for kegger-0.1.0-py3-none-any.whl:

Publisher: publish.yml on csaltikov/kegger

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page