kyutils
kyu's utils
examples
- behavior
- given the extracted DIO dat files from a SpikeGadgets
recfile, plots the time course of the animal's decisions in the W-track task and indicates rewarded trials - plots place field
- figures out the 2d distance by constructing a graph from trajectories
- given the extracted DIO dat files from a SpikeGadgets
- nwb
- basic NWB conversion of ephys data
- probe
probeinterface.Probeobjects for the 15um and 20um versions of the Livermore polymer probes
- spikegadgets
- generates a trodesconf file based on a list of Livermore probe types; e.g. if implanting three Livermore probes (one 15um type and two 20um type) in alternating order, can pass the list
[20, 15, 20]and will generate a trodesconf file with the contacts arranged geometrically - generate a trodesconf file given the number of channels; good for reconfiguring
- parses the header of a SpikeGadgets
recfile
- generates a trodesconf file based on a list of Livermore probe types; e.g. if implanting three Livermore probes (one 15um type and two 20um type) in alternating order, can pass the list
- spikesorting
- plots spike waveform in probe geometry
- computes standard metrisc for frank lab
- generates figurl
installation
pip install kyutils
for the version that creates figurls, do pip install "kyutils[figurl]" and set up kachery-cloud.
1 maintainer
Metadata
1 maintainer
Release files for kyutils 0.1.121
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| kyutils-0.1.121.tar.gz | 43.1 kB | Details |
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|---|---|---|---|---|
| kyutils-0.1.121-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 93.7 kB
Release files / kyutils-0.1.121.tar.gz
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