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Python package exposing the LambdaHappy class

Project description

1. Abstract

In Data Science, the goal is often to explain the target variable Y in terms of the input X as :

  • Y = f_alpha(X) + epsilon

    where:

    • epsilon ~ N(0,1) is Gaussian noise,
    • X is an n x p data matrix,
    • Y is an n x 1 vector,
    • and alpha represents the model parameters.

The function f can be linear or nonlinear, for instance implemented as a neural network. In this case, alpha corresponds to the set of weights and biases of the network.

Sylvain Sardy (ref) proposed a relaxation technique to estimate the parameters alpha:

  • alpha_hat = argmin_alpha (||Y-f_alpha(X)||_2 + lambda * ||alpha||_1 )

One of the main challenges is choosing the regularization parameter lambda :

  • If lambda is too large, the resulting model will be overly sparse and inaccurate.
  • If lambda is too small, the model will be accurate but not sparse enough.

The goal is to find the best trade-off :

  • The package implements Sardy’s algorithm to compute the optimal lambda.
  • The implementation automatically runs on one or multiple GPUs if available, or on the CPU otherwise.
  • An auto-detection feature ensures the best use of the available hardware.

The optimal value, referred to as the “lambda happy”, is computed as :

  • lambda_happy = quantile_0.95( || X^T * Z_centered ||_∞ / || Z_centered ||_2 )

  • where the numerator uses the Chebyshev (L∞) norm and the denominator the Euclidean (L2) norm.

  • Here, Z_centered is an n x m random matrix (with m typically large enough for accurate quantile estimation).

  • Each column of Z is drawn independently from N(0,1) and then centered (its mean is subtracted so that every column has zero mean).

A version including support for Mac and Windows platforms has been developed for wider use without specific CUDA code, based on the PyTorch library. See: https://pypi.org/project/torch-lambda-happy/

ℹ️ This package is currently compatible only with Python 3.10 on Linux x86_64.

2. Installation

Here is how to install the package with its dependencies. The torch library must be installed separately depending on the operating system.

2.1 Install the lambda-happy library :

Only the lambda-happy package below is required. The others are optional and can be used for benchmarking or validation. In all cases, however, you must install the PyTorch dependency described below.

# Core functionality
pip install lambda-happy

# Benchmark GUI (PyQt5)
pip install lambda-happy[benchmark]

# Validation tools (PyQt5 + pandas)
pip install lambda-happy[validation]

# All extras (Benchmark + Validation tools)
pip install lambda-happy[all]

2.2 Dependencies

The backend relies on PyTorch and CUDA, depending on your hardware. You must therefore install the corresponding PyTorch version.

  • Linux (successfully tested)
pip3 install torch torchvision --index-url https://download.pytorch.org/whl/cu118

ℹ️ This project was developed on Ubuntu 22.04 with CUDA 11.8 (2025).

3. Examples and recommendations

3.1 Recommended use case

Here is an example using best practices. It is always preferable to create the matrix on the correct device to avoid unnecessary conversion.

import torch
from lambda_happy import LambdaHappy

# Prepare data
X = torch.randn(1000, 5000, device="cuda")

# Initialize solver (auto‐select the fastest backend)
solver = LambdaHappy(X, force_fastest=True)

# Single estimate
lambda_value = solver.compute(m=10000)
print(f"lambda_value: {lambda_value:.4f}")

# Multiple runs
lambda_values = solver.compute_many(m=10000, nb_run=50)
print(f"lambda_values: {lambda_values}")

# Aggregated (median)
lambda_median = solver.compute_agg(m=10000, nb_run=500, func=torch.median)
print(f"lambda_median: {lambda_median:.4f}")

3.2 Example with all parameters (single estimation)

import torch
from lambda_happy import LambdaHappy

matX = torch.randn(1_000, 1_000)
model = LambdaHappy(X=matX, force_fastest=False, use_multigpu=False)
lambda_value = model.compute(m=10_000, version="AUTOMATIC", dtype=torch.float16, device_type="cuda")
print(f"Estimated lambda: {lambda_value:.4f}")

3.3 Example with all parameters (many estimations)

import torch
from lambda_happy import LambdaHappy

matX = torch.randn(1_000, 1_000)
model = LambdaHappy(X=matX, force_fastest=True, use_multigpu=False)
lambda_values = model.compute_many(m=10_000, version="AUTOMATIC", dtype=torch.float32, device_type="cuda", nb_run=100)
print(f"Estimated lambdas: {lambda_values}")

3.4 Example with all parameters (aggregated estimation)

import torch
from lambda_happy import LambdaHappy

matX = torch.randn(1_000, 1_000)
model = LambdaHappy(X=matX, force_fastest=True, use_multigpu=True)
lambda_mean = model.compute_agg(
    m=10_000, version="AUTOMATIC", dtype=torch.float32, device_type="cpu", nb_run=10, func=torch.mean
)
print(f"Estimated lambda: {lambda_mean:.4f}")

⚠️ The examples above illustrate different ways of using the library, but they are not necessarily the fastest methods.
For the most efficient versions, please refer to the 3.1 Recommended use case section.

ℹ️ Use float16 (or force_fastest=True) on GPU only if the input matrix X is normalized. Setting use_multigpu=True will utilize all available GPUs if more than one is present.

3.5 Recommended Settings

Context Data Type Notes
CPU float32 Stable, widely supported, and generally the fastest on CPU.
GPU (CUDA) float16 High performance if X is normalized; otherwise use float32.
Backend "AUTOMATIC" Selects the best available implementation based on hardware and dtype.

4. Performance Trade-Offs

4.1 Projection Dimension (m)

  • ↑ m → improves lambda_happy precision.
  • ↑ m → linearly increases compute time (all kernels scale with m).
  • Recommended: m = 10_000 provides good accuracy in most cases.

ℹ️ Use float16 on GPU only if the input matrix X is normalized. Otherwise, lambda_happy estimation may be unstable or inconsistent.

4.2 Sample Dimension (n)

  • ↑ n → increases cost in all kernels (since Z ∈ R^(n × m)), except for the quantile post-processing step.

4.3 Feature Dimension (p)

  • ↑ p → only affects the X^T·Z matrix multiplication.

5. Benchmark

The lambda-happy-benchmark script measures and compares the performance of LambdaHappy on CPU and GPU. It offers various benchmarking options and displays live throughput plots. Example usage :

lambda-happy-benchmark --benchmark_2D --benchmark_3D --benchmark_float --device cuda --dtype float32 -n 1000 -p 1000 -m 10000

This runs a 2D benchmark using CUDA with specified matrix dimensions and then run a 3D benchmark.

ℹ️ Note: Not all hyperparameters are used for every plot, but if provided, they will be applied when relevant.

6. Validation

The lambda-happy-validation script runs tests to validate lambda_happy estimation accuracy. It generates detailed reports and distribution plots using pandas and PyQt5.

Example usage :

lambda-happy-validation --distribution_small --distribution_large --device cuda --dtype float32 -n 1000 -p 1000

This plots small and large scale lambda_happy distributions on CUDA for the given parameters.

7. Performance comparison

Here are the results for a CUDA calculation :

Rank Mode Version Precision FPS Speed-up
1 Mono-GPU SMART_TENSOR Float32 449 1.00x
2 Mono-GPU GPU_DEDICATED Float32 501 1.12x
3 Multi-GPU SMART_TENSOR Float32 511 1.14x
4 Multi-GPU SMART_TENSOR Float16 664 1.48x
5 Multi-GPU GPU_DEDICATED Float32 911 2.03x
6 Mono-GPU SMART_TENSOR Float16 1215 2.71x
7 Mono-GPU GPU_DEDICATED Float16 1618 3.60x
8 Multi-GPU GPU_DEDICATED Float16 2104 4.69x

ℹ️ FPS : number of times the lambda_happy value is estimated per second.

The test server is equipped with an Intel Xeon E5-2699 v3 processor (2014) and three NVIDIA GeForce RTX 2080 Ti graphics cards (2018).

The evaluation uses the default parameters, with X of size 1000x1000 and m=10000.

ℹ️ Note: Use device="cuda" when you create X.

8. About This Project

This package, including performance optimizations, was developed as part of a Bachelor’s thesis at HE-Arc by Sevan Yerly (sevan.yerly@he-arc.ch), under the supervision of Cédric Bilat (cedric.bilat@he-arc.ch). The mathematical foundations were developed by Sylvain Sardy (sylvain.sardy@unige.ch).

For questions or contact : sevan.yerly@he-arc.ch or cedric.bilat@he-arc.ch

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