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Lattice-based Cellular Simulation

Project description

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LattiCS (Lattice-based Cellular Simulator) is a flexible agent-based simulation framework designed to help you model the collective behavior of cellular systems and to support experimental biology.

Features

  • Simple. Customize key biological properties of individual cell agents, including cell cycle dynamics, cell-cell adhesion, motility, and phenotype changes. Simulate the transport of nutrients or drugs and their effects on cells. Define custom events during the simulation, such as treatments.

  • Ready-to-use. Launch virtual experiments with minimal coding, using built-in tools tailored for common tasks.

  • Accessible. Build your own models in Python without needing expert-level programming knowledge.

Installation

You can install LattiCS directly from this repository using pip. See details here .

Documentation

https://kissdaniel.github.io/lattics

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