Plot Linkage Disequilibrium
Project description
LD plot
Plot of a Linkage Disequilibrium (LD) matrix in Python
Installation
pip
pip install ld-plot
Usage
from ld_plot.ld_plot import ld_plot
# LD: A symmetric LD matrix
# labels: A list of position names
figure = ld_plot(ld=LD, labels=labels)
figure.savefig('ld_plot.png')
Example output
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