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Plot Linkage Disequilibrium

Project description

LD plot

Plot of a Linkage Disequilibrium (LD) matrix

Installation

pip

pip install ld-plot

Usage

from src.ld_plot.ld_plot import ld_plot

# LD: A symmetric LD matrix
# labels: A list of position names
figure = ld_plot(ld=LD, labels=labels)
figure.savefig('ld_plot.png')

Example output

example

Project details


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