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leech-core

Rust acceleration for leech — Learning Enhanced Electrical Classifiers from Hanopore signals.

This package ships the compiled leech_core extension module: POD5 I/O with a process-global reader cache, signal-map refinement, per-base statistics, signal_kmer encoding, and the batched chunk-extraction pipelines used by leech data prepare and leech predict.

It is not useful on its own. Install it through leech:

pip install "leech[rust]"

leech runs without it — every accelerated path has a pure-Python fallback — but preparation and inference are substantially faster with it installed. leech-core is released in lockstep with leech and reports a matching __version__; check-rust warns if the two ever diverge.

Wheels are published for manylinux x86_64 and aarch64. On other platforms pip falls back to the sdist, which needs a Rust toolchain and network access to github.com (the escapepod-signal dependency is fetched from git, not crates.io).

MIT licensed. Source, issues, and documentation live in the leech repository.

Release files for leech-core 0.12.1

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Source distribution (sdist)

Source distribution for leech-core 0.12.1
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leech_core-0.12.1.tar.gz 40.9 kB Details

Built distributions (wheels)

Table of built distributions (wheels) for leech-core 0.12.1
File Interpreter ABI Platform
leech_core-0.12.1-cp312-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl CPython 3.12 abi3 Linux glibc 2.17+ x86-64 Details
leech_core-0.12.1-cp312-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl CPython 3.12 abi3 Linux glibc 2.17+ ARM64 Details

Total release size: 2.9 MB

Release files / leech_core-0.12.1.tar.gz

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Download URL leech_core-0.12.1-cp312-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl
Size 1.4 MB
Tags CPython 3.12 Linux glibc 2.17+ ARM64 abi3
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Release history Release notifications | RSS feed

0.14.0

3 release files

0.13.1

3 release files

0.13.0

3 release files

0.12.3

3 release files

0.12.2

3 release files

This release

0.12.1 This release

3 release files

0.12.0

3 release files

0.11.1

3 release files

0.10.0

3 release files

0.9.0

3 release files

0.8.0

3 release files

0.7.0

3 release files

0.6.7

3 release files

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