Skip to main content

ENA数据库高通量数据元数据(.txt)批量下载器

Project description

本代码主要通过构筑检索式无头浏览下载ENA数据库中高通量测序数据的元数据

安装通过以下代码

pip install lgl_get_ena_metafile

使用需要依次传入3个参数,分别为

input_list_txt:数据文件所在路径

download_path:文件下载路径

chromedriver :谷歌浏览器驱动程序绝对路径

通过以下代码使用:

from lgl_get_ena_metafile import get_ena_metafile

download_path = r"C:\Users\Huawei\Desktop\test"    ##定义下载地址
input_list_txt = r'C:\Users\Huawei\Desktop\test_sra.txt'  ##定义输入文件路径
chromedriver = r"C:\Program Files (x86)\Google\Chrome\Application\chromedriver.exe"   ##定义浏览器驱动地址

get_ena_metafile(input_list_txt,download_path,chromedriver) 

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

lgl_get_ena_metafile-3.0.tar.gz (3.9 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

lgl_get_ena_metafile-3.0-py3-none-any.whl (4.4 kB view details)

Uploaded Python 3

File details

Details for the file lgl_get_ena_metafile-3.0.tar.gz.

File metadata

  • Download URL: lgl_get_ena_metafile-3.0.tar.gz
  • Upload date:
  • Size: 3.9 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.5.0.1 requests/2.22.0 requests-toolbelt/0.9.1 tqdm/4.42.1 CPython/3.7.6

File hashes

Hashes for lgl_get_ena_metafile-3.0.tar.gz
Algorithm Hash digest
SHA256 bdaf19e882097e687868a7469c36bc8e5879b1d61e3f44343fd8b28a48b67f8f
MD5 781f285870f0d08c420a9522dc056b6b
BLAKE2b-256 a6263b7629741daee1d8ad242280ab506517a7991f37971304fa12974f0b2ba6

See more details on using hashes here.

File details

Details for the file lgl_get_ena_metafile-3.0-py3-none-any.whl.

File metadata

  • Download URL: lgl_get_ena_metafile-3.0-py3-none-any.whl
  • Upload date:
  • Size: 4.4 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.5.0.1 requests/2.22.0 requests-toolbelt/0.9.1 tqdm/4.42.1 CPython/3.7.6

File hashes

Hashes for lgl_get_ena_metafile-3.0-py3-none-any.whl
Algorithm Hash digest
SHA256 a83526ef00ae000e0ef753d8a312ea63fa9b4c2893922b8408317b030c8bb1e9
MD5 c9c3fc6b2a57ec087416696899063783
BLAKE2b-256 e9c8d21f393b3a2412be578412ec90f7d8614bc78ac88f8f0c2cd44849f5c465

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page