llama-index readers pdb integration
Project description
Protein Data Bank (PDB) publication Loader
pip install llama-index-readers-pdb
This loader fetches the abstract of PDB entries using the RCSB (Research Collaboratory for Structural Bioinformatics) or EBI (European Bioinformatics Institute) REST api.
Usage
To use this loader, simply pass an array of PDB ids into load_data:
from llama_index.readers.pdb import PdbAbstractReader
loader = PdbAbstractReader()
documents = loader.load_data(pdb_id=["1cbs"])
This loader is designed to be used as a way to load data into LlamaIndex.
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