Features
Provides robust stitching of tiled microscope images on a regular grid, mostly following algorithm by MIST but improved in several points.
Supports missing tiles.
Installation
You can install M2Stitch via pip from PyPI:
$ pip install m2stitchUsage
Please see the Usage for details.
Contributing
Contributions are very welcome. To learn more, see the Contributor Guide.
License
Distributed under the terms of the MIT license, M2Stitch is free and open source software.
Issues
If you encounter any problems, please file an issue along with a detailed description.
Credits
This program is an unofficial implementation of MIST stitching algorithm on GitHub. The original paper is here.
This project was generated from @cjolowicz’s Hypermodern Python Cookiecutter template.
Citation
If you use this program for your research, please cite it and help us build more.
@misc{m2stitch,
author = {Yohsuke T. Fukai},
title = {m2stitch},
year = {2021},
url = {https://doi.org/10.5281/zenodo.5139596},
}Other Python stitching programs
One might also be interested in another Python-written stitching tool ASHLAR (bioRxiv), with a comparable performance to that of MIST and additional features.
1 maintainer
Metadata
1 maintainer
Release files for m2stitch 0.7.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| m2stitch-0.7.2.tar.gz | 13.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| m2stitch-0.7.2-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 28.5 kB
Release files / m2stitch-0.7.2.tar.gz
| Download URL | m2stitch-0.7.2.tar.gz |
|---|---|
| Size | 13.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / m2stitch-0.7.2-py3-none-any.whl
| Download URL | m2stitch-0.7.2-py3-none-any.whl |
|---|---|
| Size | 15.2 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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