Package for making genome related plots
Project description
Maphelios
Package to find and plot inserts alongside the genome or contigs.
BLAST is required. You can follow the instructions to download and install BLAST here.
Installation
pip install git+https://git.embl.org/grp-zimmermann-kogadeeva/Maphelios.git
Running
Docker
To run the streamlit app with docker:
docker run -it --rm -p 8501:8501 docker://registry.git.embl.org/grp-zimmermann-kogadeeva/maphelios:0.7.3
Apptainer
To run the streamlit app with apptainer:
apptainer exec --no-home --writable-tmpfs --workdir /app docker://registry.git.embl.org/grp-zimmermann-kogadeeva/maphelios:0.7.3 streamlit run /app/app/app.py --server.headless true
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
maphelios-0.8.5.tar.gz
(20.8 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
maphelios-0.8.5-py3-none-any.whl
(22.6 kB
view details)
File details
Details for the file maphelios-0.8.5.tar.gz.
File metadata
- Download URL: maphelios-0.8.5.tar.gz
- Upload date:
- Size: 20.8 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.2.0 CPython/3.12.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
d2bd6ba5c857d538240c1fd97828dc7b2548b883a187cab3dca05ce8c62513c0
|
|
| MD5 |
950e2dfd99d87e52b8f5dbe30179379c
|
|
| BLAKE2b-256 |
b9e384a9524064e23e6fbefd15bb402ba43544359c77bb4c90783bbc1930cf0e
|
File details
Details for the file maphelios-0.8.5-py3-none-any.whl.
File metadata
- Download URL: maphelios-0.8.5-py3-none-any.whl
- Upload date:
- Size: 22.6 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.2.0 CPython/3.12.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
5fa8f56b6fb88fc5def97c9519e8b2f0d9fb3b0965a09d23cac413acd286ea93
|
|
| MD5 |
b652acd7f8daee6d6ec253d2825873eb
|
|
| BLAKE2b-256 |
30e49fa6e419f90e0487a6017468b1a7250d47e3b6072fc21f5c3afbd89ba35a
|
