Skip to main content

Bootstrap-based model stability and supervised binning toolkit

Project description

Bootstrap ML diagnostics + statistical inference + Spark

A lightweight toolkit for statistically robust model diagnostics using bootstrap resampling, with both in-memory and distributed (PySpark) support.

The library provides utilities for:

  • supervised tree binning
  • bootstrap-based feature selection
  • model stability analysis
  • hyperparameter sensitivity analysis
  • statistical feature diagnostics (e.g., logistic relevance, missing analysis)
  • scalable data diagnostics with PySpark

The toolkit focuses on reducing overfitting and improving model interpretability by leveraging bootstrap distributions and statistical inference rather than single-point estimates.


Installation

Option Command
Core (minimal dependencies) pip install maxwailab
Survival Module Only pip install maxwailab[survival]
PySpark Module Only pip install maxwailab[pyspark]
Everything (core + all optional) pip install maxwailab[all]
Core from GitHub pip install git+https://github.com/MaxWienandts/maxwailab.git
GitHub with survival extras pip install "git+https://github.com/MaxWienandts/maxwailab.git#egg=maxwailab[survival]"
GitHub with PySpark extras pip install "git+https://github.com/MaxWienandts/maxwailab.git#egg=maxwailab[pyspark]"

Core Philosophy

Most ML workflows rely on single train/validation splits.

This library instead uses bootstrap resampling to estimate:

  • performance distributions
  • feature selection stability
  • hyperparameter robustness

Benefits:

  • reduces variance from a single split
  • identifies unstable variables
  • provides confidence intervals for model performance

Workflow Overview

Typical modeling workflow using this library:

1️⃣ Supervised binning (optional)

tree_supervised_binning
bootstrap_tree_binning_auc_analysis
plot_target_mean_by_binned_variable


2️⃣ Feature selection

bootstrap_lightgbm_forward_selection
bootstrap_model_variable_comparison_paired

3️⃣ Diagnostics

performance_forward_selection_boxplot
variable_frequency_forward_selection


4️⃣ Extract best variables

top_k_forward_selection_variables_by_frequency_usage
top_k_variables_by_forward_selection_boxplot


5️⃣ Hyperparameter analysis

lightgbm_hyperparameter_auc_curve_bootstrap

6️⃣ Survival Analysis (Optional)
bootstrap_survival_forward_selection
bootstrap_model_variable_comparison_paired
survival_bootstrap_model_comparison

7️⃣ PySpark Data Diagnostics
pyspark_missing_values_table
pyspark_minmax_value
pyspark_compare_columns
pyspark_value_counts_spark
pyspark_missing_by_group
pyspark_logistic_feature_significance

LightGBM Classification Example

import maxwailab

# Forward selection with bootstrap
result_bootstrap = maxwailab.bootstrap_lightgbm_forward_selection(
    df=data,
    target="target",
    n_bootstrap=30,
    n_max_variables=15,
    metric_to_optimize="auc_roc",
    hyperparameters=lgb_params
)

# Analyze performance stability
maxwailab.performance_forward_selection_boxplot(result_bootstrap["auc_roc"], "AUC")

# Variable selection stability
maxwailab.variable_frequency_forward_selection(result_bootstrap["variables"], n_bootstraps=30)

# Extract best variables
top_vars = maxwailab.top_k_forward_selection_variables_by_frequency_usage(result_bootstrap["variables"], n_bootstraps=30, k=10)
# Or
top_vars = maxwailab.top_k_variables_by_forward_selection_boxplot(result_bootstrap["variables"], n_bootstraps=30, k=10)

Paired Bootstrap Comparison (LightGBM)

Compare two models: baseline vs modified (adding/removing variables):

comparison = maxwailab.bootstrap_model_variable_comparison_paired_lgbm(
    df_train=df_train,
    base_variables=["var1", "var2"],
    variables_to_add=["var3"],
    variables_to_remove=["var2"],
    target_col="target",
    n_bootstrap=100,
    metric="auc",
    hyperparameters=lgb_params
)

Generates:

  • Validation performance distributions
  • Paired bootstrap difference distribution
  • Statistical summary (mean, 95% CI, probability of improvement)

Tree-based Supervised Binning

from maxwailab import tree_supervised_binning

tree_supervised_binning(df=data, feature="age", target="target", max_leaf_nodes=5)

# Bootstrap binning stability
bootstrap_tree_binning_auc_analysis(df_train, df_val, feature="age", target="target")
Hyperparameter Sensitivity Analysis
lightgbm_hyperparameter_auc_curve_bootstrap(
    X_train, y_train, X_val, y_val,
    hyperparameters=lgb_params,
    hyperparameter_name="num_leaves",
    hyperparameter_values=[5,10,20,40],
    n_bootstrap=50
)

Analyze target behavior across variable ranges

# Define bins (no need for -inf / +inf)
bins = [0, 18, 30, 50, 80]

summary = plot_target_mean_by_binned_variable(
    df=data,
    target="target",
    variable="age",
    bins=bins
)
  • Visualizes target mean per bin
  • Displays observation count and percentage
  • Useful for feature understanding and pre-binning analysis

Survival Analysis Workflows

Bootstrap Forward Selection for Survival Models

result_survival = maxwailab.bootstrap_survival_forward_selection(
    df_train=df_train,
    duration_col="duration",
    event_col="event",
    start_month_col="start_month",
    model_type="cox_breslow",
    n_bootstrap=50,
    n_max_variables=10,
    metric_to_optimize="c_index",
    hyperparameters=cox_params
)

# Analyze performance stability
maxwailab.performance_forward_selection_boxplot(result_survival["auc_roc"], "AUC")

# Variable selection stability
maxwailab.variable_frequency_forward_selection(result_survival["variables"], n_bootstraps=30)

# Extract best variables
top_vars = maxwailab.top_k_forward_selection_variables_by_frequency_usage(result_survival["variables"], n_bootstraps=30, k=10)
# Or
top_vars = maxwailab.top_k_variables_by_forward_selection_boxplot(result_survival["variables"], n_bootstraps=30, k=10)

Paired Bootstrap Comparison for Survival Models

comparison_surv = maxwailab.bootstrap_model_variable_comparison_paired(
    df_train=df_train,
    model_type="cox_breslow",
    base_variables=["var1", "var2"],
    variables_to_add=["var3"],
    variables_to_remove=["var2"],
    n_bootstrap=50,
    metric="c_index"
)

Generates:

  • Baseline vs Modified model performance distribution
  • Paired difference plot
  • Statistical inference summary

Compare Multiple Survival Models

models_dict = {
    "Cox": CoxModel(),
    "AFT": AFTModel()
}

comparison_multi = maxwailab.survival_bootstrap_model_comparison(
    df_train=df_train,
    models_dict=models_dict,
    feature_cols=["var1", "var2", "var3"],
    n_bootstrap=50
)

Outputs:

  • Bootstrap distributions per model
  • Ranking summary

🔍 Additional Utilities

The examples above cover the core functionality of the library.
maxwailab also includes several additional utilities for:

  • PySpark-based data diagnostics
  • statistical feature analysis
  • extended bootstrap evaluations
  • survival modeling workflows

For a complete list of available functions and usage examples, refer to the notebooks/ directory in the repository, which contains practical, end-to-end implementations.


Module Structure

maxwailab
│
├── binning
│   ├── tree_supervised_binning
│   ├── bootstrap_tree_binning_auc_analysis
│   └── plot_target_mean_by_binned_variable
│
├── feature_selection
│   ├── bootstrap_lightgbm_forward_selection
│   ├── performance_forward_selection_boxplot
│   ├── variable_frequency_forward_selection
│   ├── top_k_forward_selection_variables_by_frequency_usage
│   ├── top_k_variables_by_forward_selection_boxplot
│   └── bootstrap_model_variable_comparison_paired_lgbm
│
├── hyperparameter_analysis
│   └── lightgbm_hyperparameter_auc_curve_bootstrap
│
├── survival_feature_selection
│   ├── bootstrap_survival_forward_selection
│   ├── bootstrap_model_variable_comparison_paired
│   └── survival_bootstrap_model_comparison
│
├── pyspark_basic_functions
│   ├── pyspark_missing_values_table
│   ├── pyspark_minmax_value
│   ├── pyspark_compare_columns
│   ├── pyspark_value_counts_spark
│   ├── pyspark_missing_by_group
│   └── pyspark_logistic_feature_significance


When to Use This Library

This library is particularly useful for:

  • credit risk models
  • tabular ML problems
  • high-stakes predictive modeling
  • interpretable ML workflows
  • Using large-scale datasets with PySpark

License

MIT License

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

maxwailab-1.3.1.tar.gz (28.6 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

maxwailab-1.3.1-py3-none-any.whl (27.9 kB view details)

Uploaded Python 3

File details

Details for the file maxwailab-1.3.1.tar.gz.

File metadata

  • Download URL: maxwailab-1.3.1.tar.gz
  • Upload date:
  • Size: 28.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.12.0

File hashes

Hashes for maxwailab-1.3.1.tar.gz
Algorithm Hash digest
SHA256 8e875722ff6af0565b293237f72f4edc5881196e894764652eb0f58e3c6e6909
MD5 bb0b63bec80658c06823c2fc84245c0e
BLAKE2b-256 0a9f8b950ce63cff8e0db2845c144e5179fe1338573f1ff00bac33081cf6c51d

See more details on using hashes here.

File details

Details for the file maxwailab-1.3.1-py3-none-any.whl.

File metadata

  • Download URL: maxwailab-1.3.1-py3-none-any.whl
  • Upload date:
  • Size: 27.9 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.12.0

File hashes

Hashes for maxwailab-1.3.1-py3-none-any.whl
Algorithm Hash digest
SHA256 6bfa0e7765831026ef89ab25cf655fd24d7ae0571187c8a08c8912a6eb4d78a4
MD5 7b5ad85398560862f0fe24ba108e956c
BLAKE2b-256 7b2e1deca1d29e046d403fe2ff72ca368212d43801a6f2c18964644a55cf80ad

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page