MCP ClickHouse Cloud Server

A comprehensive Model Context Protocol (MCP) server for ClickHouse database operations and ClickHouse Cloud management.

Why This Server?

This repository is a significant improvement over the original ClickHouse MCP server. While the original server only supports basic database operations (list databases, run SELECT queries, and list tables), this enhanced version provides:

• 50+ Cloud Management Tools: Complete ClickHouse Cloud API integration for organizations, services, API keys, members, backups, and more
• Superior Code Quality: Well-structured, maintainable codebase with proper error handling and type hints
• Enhanced Database Operations: Extended functionality with metadata access and safety guarantees
• Production Ready: Comprehensive configuration options, SSL support, and robust error handling

Features

Database Operations

• List databases: Get all available databases
• List tables: Get detailed table information including schema, row counts, and column details
• Run SELECT queries: Execute read-only queries with timeout protection and safety guarantees
• Metadata access: Full access to ClickHouse system tables

ClickHouse Cloud Management (50+ Tools)

• Organizations: List, get details, update settings, view metrics
• Services: Create, manage, start/stop, configure scaling, delete services
• API Keys: Create, list, update, delete API keys
• Members: Manage organization members and roles
• Invitations: Send and manage organization invitations
• Backups: List, configure, and manage service backups
• ClickPipes: Manage data ingestion pipelines (Beta)
• Activities: View audit logs and organization activities
• Usage & Costs: Get detailed usage and cost analytics
• Private Endpoints: Configure private network access

Configuration

Claude Desktop Setup

1. Open the Claude Desktop configuration file located at:

   • On macOS: ~/Library/Application Support/Claude/claude_desktop_config.json
   • On Windows: %APPDATA%/Claude/claude_desktop_config.json

2. Add the following configuration:

For Your Own ClickHouse Server

{
  "mcpServers": {
    "mcp-clickhouse-cloud": {
      "command": "uv",
      "args": [
        "run",
        "--with",
        "mcp-clickhouse-cloud",
        "--python",
        "3.13",
        "mcp-clickhouse-cloud"
      ],
      "env": {
        "CLICKHOUSE_HOST": "",
        "CLICKHOUSE_PORT": "",
        "CLICKHOUSE_USER": "",
        "CLICKHOUSE_PASSWORD": "",
        "CLICKHOUSE_SECURE": "true",
        "CLICKHOUSE_VERIFY": "true",
        "CLICKHOUSE_CONNECT_TIMEOUT": "30",
        "CLICKHOUSE_SEND_RECEIVE_TIMEOUT": "300"
      }
    }
  }
}

For ClickHouse SQL Playground (Free Testing)

{
  "mcpServers": {
    "mcp-clickhouse-cloud": {
      "command": "uv",
      "args": [
        "run",
        "--with",
        "mcp-clickhouse-cloud",
        "--python",
        "3.13",
        "mcp-clickhouse-cloud"
      ],
      "env": {
        "CLICKHOUSE_HOST": "sql-clickhouse.clickhouse.com",
        "CLICKHOUSE_PORT": "8443",
        "CLICKHOUSE_USER": "demo",
        "CLICKHOUSE_PASSWORD": "",
        "CLICKHOUSE_SECURE": "true",
        "CLICKHOUSE_VERIFY": "true",
        "CLICKHOUSE_CONNECT_TIMEOUT": "30",
        "CLICKHOUSE_SEND_RECEIVE_TIMEOUT": "300"
      }
    }
  }
}

3. Important: Locate the command entry for uv and replace it with the absolute path to the uv executable. On macOS, find this path using which uv.

4. Restart Claude Desktop to apply the changes.

Installation

Option 1: Using uv (Recommended)

# Install via uv (used by Claude Desktop)
uv add mcp-clickhouse-cloud

Option 2: Manual Installation

# Clone the repository
git clone 
cd mcp-clickhouse-cloud

# Install dependencies
pip install -r requirements.txt

# Set up environment variables
cp .env.example .env
# Edit .env with your configuration

Environment Variables

Database Configuration (Required for database tools)

Required Variables

CLICKHOUSE_HOST=your-clickhouse-host.com    # ClickHouse server hostname
CLICKHOUSE_USER=your-username               # Username for authentication
CLICKHOUSE_PASSWORD=your-password           # Password for authentication

Optional Variables (with defaults)

CLICKHOUSE_PORT=8443                        # 8443 for secure, 8123 for non-secure
CLICKHOUSE_SECURE=true                      # Enable HTTPS connection
CLICKHOUSE_VERIFY=true                      # Verify SSL certificates
CLICKHOUSE_CONNECT_TIMEOUT=30               # Connection timeout in seconds
CLICKHOUSE_SEND_RECEIVE_TIMEOUT=300         # Query timeout in seconds
CLICKHOUSE_DATABASE=default                 # Default database to use
CLICKHOUSE_PROXY_PATH=                      # Path for HTTP proxy

SSL Configuration Issues

If you encounter SSL certificate verification issues, you can disable SSL verification:

CLICKHOUSE_VERIFY=false                     # Disable SSL certificate verification

Cloud API Configuration (Required for cloud tools)

# Required - Get these from ClickHouse Cloud Console
CLICKHOUSE_CLOUD_KEY_ID=your-cloud-key-id
CLICKHOUSE_CLOUD_KEY_SECRET=your-cloud-key-secret

# Optional
CLICKHOUSE_CLOUD_API_URL=https://api.clickhouse.cloud
CLICKHOUSE_CLOUD_TIMEOUT=30
CLICKHOUSE_CLOUD_SSL_VERIFY=true           # Set to "false" for SSL issues

Cloud API SSL Configuration Issues

If you encounter SSL certificate verification issues with the Cloud API:

CLICKHOUSE_CLOUD_SSL_VERIFY=false          # Disable SSL certificate verification for Cloud API

Example Configurations

Local Development with Docker

CLICKHOUSE_HOST=localhost
CLICKHOUSE_USER=default
CLICKHOUSE_PASSWORD=clickhouse
CLICKHOUSE_SECURE=false                     # Uses port 8123 automatically
CLICKHOUSE_VERIFY=false

ClickHouse Cloud

CLICKHOUSE_HOST=your-instance.clickhouse.cloud
CLICKHOUSE_USER=default
CLICKHOUSE_PASSWORD=your-password
# CLICKHOUSE_SECURE=true                    # Uses port 8443 automatically
# CLICKHOUSE_DATABASE=your_database

ClickHouse SQL Playground

CLICKHOUSE_HOST=sql-clickhouse.clickhouse.com
CLICKHOUSE_USER=demo
CLICKHOUSE_PASSWORD=
# Uses secure defaults (HTTPS on port 8443)

Available Tools

Database Tools (3 tools)

• list_databases() - List all databases
• list_tables(database, like?, not_like?) - List tables with metadata
• run_select_query(query) - Execute SELECT queries (all queries run with readonly = 1 for safety)

Cloud Tools (50+ tools)

Organization Management

• cloud_list_organizations() - List available organizations
• cloud_get_organization(organization_id) - Get organization details
• cloud_update_organization(organization_id, name?) - Update organization
• cloud_get_organization_metrics(organization_id, filtered_metrics?) - Get Prometheus metrics

Service Management

• cloud_list_services(organization_id) - List all services
• cloud_get_service(organization_id, service_id) - Get service details
• cloud_create_service(organization_id, name, provider, region, ...) - Create new service
• cloud_update_service_state(organization_id, service_id, command) - Start/stop service
• cloud_update_service_scaling(organization_id, service_id, ...) - Configure auto-scaling
• cloud_update_service_password(organization_id, service_id, ...) - Update password
• cloud_delete_service(organization_id, service_id) - Delete service
• cloud_get_service_metrics(organization_id, service_id, ...) - Get service metrics

API Key Management

• cloud_list_api_keys(organization_id) - List API keys
• cloud_create_api_key(organization_id, name, roles, ...) - Create API key
• cloud_delete_api_key(organization_id, key_id) - Delete API key

Member Management

• cloud_list_members(organization_id) - List organization members
• cloud_update_member_role(organization_id, user_id, role) - Update member role
• cloud_remove_member(organization_id, user_id) - Remove member

Invitation Management

• cloud_list_invitations(organization_id) - List pending invitations
• cloud_create_invitation(organization_id, email, role) - Send invitation
• cloud_delete_invitation(organization_id, invitation_id) - Cancel invitation

Backup Management

• cloud_list_backups(organization_id, service_id) - List service backups
• cloud_get_backup(organization_id, service_id, backup_id) - Get backup details
• cloud_get_backup_configuration(organization_id, service_id) - Get backup config
• cloud_update_backup_configuration(organization_id, service_id, ...) - Update backup settings

ClickPipes Management (Beta)

• cloud_list_clickpipes(organization_id, service_id) - List ClickPipes
• cloud_get_clickpipe(organization_id, service_id, clickpipe_id) - Get ClickPipe details
• cloud_update_clickpipe_state(organization_id, service_id, clickpipe_id, command) - Start/stop ClickPipe
• cloud_delete_clickpipe(organization_id, service_id, clickpipe_id) - Delete ClickPipe

Activity & Audit Logs

• cloud_list_activities(organization_id, from_date?, to_date?) - Get activity logs
• cloud_get_activity(organization_id, activity_id) - Get activity details

Usage & Cost Analytics

• cloud_get_usage_cost(organization_id, from_date, to_date) - Get cost breakdown

Utilities

• cloud_get_available_regions() - Get supported cloud regions and providers
• cloud_get_private_endpoint_config(organization_id, service_id) - Get private endpoint config

Development

Local Development Setup

1. Start ClickHouse cluster:

   cd test-services
   docker compose up -d
   

2. Create environment file:

   # Create .env file in repository root
   cat > .env << EOF
   CLICKHOUSE_HOST=localhost
   CLICKHOUSE_PORT=8123
   CLICKHOUSE_USER=default
   CLICKHOUSE_PASSWORD=clickhouse
   CLICKHOUSE_SECURE=false
   EOF
   

3. Install dependencies:

   uv sync                               # Install dependencies
   source .venv/bin/activate            # Activate virtual environment
   

4. Run the MCP server:

   mcp dev mcp_clickhouse_cloud/mcp_server.py  # Start for testing
   # OR
   python -m mcp_clickhouse_cloud.main         # Start normally
   

Running Tests

uv sync --all-extras --dev              # Install dev dependencies
uv run ruff check .                     # Run linting

docker compose up -d test_services      # Start ClickHouse
uv run pytest tests                     # Run tests

Project Structure

mcp_clickhouse_cloud/
├── __init__.py                 # Package initialization
├── main.py                     # Entry point
├── mcp_env.py                  # Database environment configuration
├── mcp_server.py              # Main server + database tools
├── cloud_config.py            # Cloud API configuration
├── cloud_client.py            # HTTP client for Cloud API
└── cloud_tools.py             # Cloud MCP tools (50+ tools)

How MCP Tool Discovery Works

1. Decorator Registration: All tools use the @mcp.tool() decorator
2. Import-based Discovery: When modules are imported, FastMCP automatically scans for decorated functions
3. Automatic Registration: All discovered tools become available through the MCP protocol
4. No Manual Setup: No need to manually register tools or maintain tool lists

Getting ClickHouse Cloud API Keys

1. Log into ClickHouse Cloud Console
2. Go to Settings → API Keys
3. Click Create API Key
4. Choose appropriate permissions (admin, developer, etc.)
5. Copy the Key ID and Key Secret to your .env file

Examples

Query Database

# List all databases
databases = list_databases()

# List tables in a specific database  
tables = list_tables("my_database")

# Run a SELECT query
result = run_select_query("SELECT count() FROM my_table")

Manage Cloud Services

# List organizations
orgs = cloud_list_organizations()

# Create a new service
service = cloud_create_service(
    organization_id="org-123",
    name="my-service", 
    provider="aws",
    region="us-east-1"
)

# Start the service
cloud_update_service_state(
    organization_id="org-123",
    service_id="service-456", 
    command="start"
)

Troubleshooting

Database Connection Issues

• Verify CLICKHOUSE_HOST, CLICKHOUSE_USER, and CLICKHOUSE_PASSWORD
• Check network connectivity to ClickHouse server
• Ensure firewall allows connections on the specified port
• For SSL issues, try setting CLICKHOUSE_VERIFY=false

Cloud API Issues

• Verify CLICKHOUSE_CLOUD_KEY_ID and CLICKHOUSE_CLOUD_KEY_SECRET
• Check API key permissions in ClickHouse Cloud Console
• Ensure API key is not expired or disabled
• For SSL issues, try setting CLICKHOUSE_CLOUD_SSL_VERIFY=false

Missing Tools

• Database tools require database configuration
• Cloud tools require cloud API configuration
• Check logs for import errors or missing dependencies

License

This project is licensed under the Apache License 2.0. See the LICENSE file for details.

Developed by Badr Ouali.