mibiremo
MiBiReMo (Microbiome Bioremediation Reaction Module) is a Python interface to the PhreeqcRM library. The package is designed to be coupled with transport models to simulate reactive transport in porous media, with applications in environmental and geochemical engineering. Developed as part of the MIBIREM toolbox for Bioremediation.
Installation
Installation of stable release from PyPI
Use pip to install the most recent stable release of mibiremo from PyPI as follows:
pip install mibiremo
Installation of most recent development version
To install mibiremo from the GitHub repository directly, do:
git clone git@github.com:MiBiPreT/mibiremo.git
cd mibiremo
python -m pip install .
Note that this is the (possibly unstable) development version from the main branch. If you want a stable release, use the PyPI installation method instead.
Examples
Examples are available in the examples directory.
Documentation
The project's full documentation is available here.
Contributing
If you want to contribute to the development of mibiremo, have a look at the contribution guidelines.
Credits
This package was created with Copier and the NLeSC/python-template.
Metadata
Release files for mibiremo 0.3.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| mibiremo-0.3.0.tar.gz | 30.1 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| mibiremo-0.3.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 59.1 MB
Release files / mibiremo-0.3.0.tar.gz
| Download URL | mibiremo-0.3.0.tar.gz |
|---|---|
| Size | 30.1 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Provenance
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Signed by GitHub Actions, verified by PyPI on Mar 3, 2026.
Transparency logRelease files / mibiremo-0.3.0-py3-none-any.whl
| Download URL | mibiremo-0.3.0-py3-none-any.whl |
|---|---|
| Size | 29.0 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Mar 3, 2026.
Transparency log