Skip to main content

End-to-end differentiable forward model for High-Energy Diffraction Microscopy (FF, NF, pf-HEDM)

Project description

midas-diffract

End-to-end differentiable forward model for High-Energy Diffraction Microscopy (HEDM), covering far-field (FF), near-field (NF), and point-focused (pf-HEDM) geometries. Pixel-exact agreement with the canonical C reference simulators in MIDAS.

Companion paper: Sharma, Zhang, Andrejevic & Cherukara, An End-to-End Differentiable Forward Model for High-Energy Diffraction Microscopy, IUCrJ (in preparation, 2026).

Installation

pip install midas-diffract           # core forward model + losses + optimizer
pip install midas-diffract[hkls]     # also installs midas-hkls for the
                                     # pure-Python reflection-list helper

Optional PyTorch CUDA or MPS back-ends are used automatically if available.

Quick start

import torch
import midas_diffract as md
from midas_hkls import Lattice, SpaceGroup           # optional, see [hkls]

# Detector + scan geometry
geom = md.HEDMGeometry(
    Lsd=1_000_000.0,              # um
    y_BC=1024.0, z_BC=1024.0,
    px=200.0,
    omega_start=0.0, omega_step=0.25, n_frames=1440,
    n_pixels_y=2048, n_pixels_z=2048,
    min_eta=6.0,
    wavelength=0.172979,           # Angstroms
)

# Reflection list: either compute from a SpaceGroup + Lattice via the
# midas-hkls helper, or supply (hkls_cart, thetas, hkls_int) yourself
# (e.g. parsed from MIDAS GetHKLList output).
sg = SpaceGroup.from_number(225)                        # FCC
lat = Lattice.for_system("cubic", a=4.08)               # Au
hkls_cart, thetas, hkls_int = md.hkls_for_forward_model(
    sg, lat, wavelength_A=geom.wavelength, two_theta_max_deg=15.0,
)

model = md.HEDMForwardModel(
    hkls=hkls_cart, thetas=thetas, geometry=geom, hkls_int=hkls_int,
)

# Forward pass: grain state -> predicted spots. All inputs are leaves
# of the autograd graph.
euler = torch.tensor([[45.0, 30.0, 60.0]], requires_grad=True) * (3.14159 / 180)
pos   = torch.tensor([[0.0, 0.0, 0.0]],  requires_grad=True)
latc  = torch.tensor([4.08, 4.08, 4.08, 90.0, 90.0, 90.0], requires_grad=True)
spots = model(euler, pos, lattice_params=latc)

# Scalar loss -> gradients w.r.t. orientation, position, lattice
loss = ((spots.omega * spots.valid) ** 2).sum()
loss.backward()

Output modes

  • md.HEDMForwardModel.predict_spot_coords(spots, space="angular") — returns (2θ, η, ω) in radians for each valid reflection (FF and pf-HEDM).
  • md.HEDMForwardModel.predict_spot_coords(spots, space="detector") — returns (y_pixel, z_pixel, frame_nr) in fractional units (FF and pf-HEDM).
  • md.HEDMForwardModel.predict_images(spots, ...) — renders a differentiable 3D detector volume via Gaussian splatting (NF-HEDM output mode).

Validation

The forward model has been validated to pixel-exact agreement against the canonical C simulators ForwardSimulationCompressed and simulateNF in the MIDAS distribution. See the companion paper and the MIDAS repository fwd_sim/paper/ directory for reproducibility scripts.

Scope

midas-diffract v0.1.x is deliberately focused on the forward model and its gradient chain. The following capabilities build on this substrate and are released separately as they mature:

  • Sub-voxel grain mixtures
  • Physics-informed regularisation
  • Bayesian uncertainty quantification via HMC / variational inference
  • Temporal 4D-HEDM tracking
  • Coupling to differentiable crystal plasticity (JAX-FEM)
  • EM spot ownership for ambiguous FF patterns

Citation

If you use midas-diffract in published work, please cite the companion paper.

Licence

BSD-3-Clause.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

midas_diffract-0.2.0.tar.gz (77.8 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

midas_diffract-0.2.0-py3-none-any.whl (49.3 kB view details)

Uploaded Python 3

File details

Details for the file midas_diffract-0.2.0.tar.gz.

File metadata

  • Download URL: midas_diffract-0.2.0.tar.gz
  • Upload date:
  • Size: 77.8 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.12

File hashes

Hashes for midas_diffract-0.2.0.tar.gz
Algorithm Hash digest
SHA256 9bfd15acc374df754816d42e6679660d976aeca353fc6c50a287f7719a4806a3
MD5 ed21311d129873620bb842c27f22caa6
BLAKE2b-256 6282d6c0e63a5d4db72dcaa944d585a8cf278b1b04617aeb1f5b9552a50e6fbb

See more details on using hashes here.

Provenance

The following attestation bundles were made for midas_diffract-0.2.0.tar.gz:

Publisher: python-packages.yml on marinerhemant/MIDAS

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file midas_diffract-0.2.0-py3-none-any.whl.

File metadata

  • Download URL: midas_diffract-0.2.0-py3-none-any.whl
  • Upload date:
  • Size: 49.3 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.12

File hashes

Hashes for midas_diffract-0.2.0-py3-none-any.whl
Algorithm Hash digest
SHA256 e5bf1304f8c7aa3d1e696e39f34865d38ce84608d97c836902fc5426d2538289
MD5 43d2c8b882a73d2c0ab3e4410420d4b8
BLAKE2b-256 c3e46fb7111f1af88bab19d11ab4275ef7651b2eb699f0c9a62e2eaa38016f52

See more details on using hashes here.

Provenance

The following attestation bundles were made for midas_diffract-0.2.0-py3-none-any.whl:

Publisher: python-packages.yml on marinerhemant/MIDAS

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page