midas-suite
A meta-package that installs the MIDAS Python pipeline in a single command.
pip install midas-suite
This pulls in the currently published MIDAS sub-packages — the FF/NF HEDM analysis chain, calibration, peak fitting, radial integration, forward model, indexing, transforms, grain processing, and stress/strain analysis.
midas-suite itself contains no scientific code. It's a thin
meta-package
whose only job is to declare the sub-packages as dependencies so users
don't have to install them one at a time.
What you get
pip install midas-suite installs 19 sub-packages (as of v0.3.1):
Top-level orchestrators (the entry points most users want):
| Sub-package | Role |
|---|---|
midas-pipeline |
Unified FF + PF orchestrator (--scan-mode {ff,pf,auto}). End-to-end from raw data through grain reconstruction; single source for both scan modes. |
midas-ff-pipeline |
Independent FF-HEDM workflow orchestrator (1-N detectors). Co-exists with midas-pipeline; same kernels under the hood. |
midas-nf-pipeline |
Pure-Python NF-HEDM pipeline orchestrator (single + multi-resolution, multi-layer). Drop-in for nf_MIDAS.py / nf_MIDAS_Multiple_Resolutions.py. |
midas-parsl-configs |
Bundled + user-extensible Parsl configs for running MIDAS pipelines on laptops, workstations, clusters. |
FF-HEDM building blocks:
| Sub-package | Role |
|---|---|
midas-peakfit |
Differentiable PyTorch peak fitting for FF-HEDM Zarr |
midas-transforms |
FF-HEDM peak transforms (merge / radius / fit-setup / save-bin) |
midas-index |
Pure-Python/PyTorch FF-HEDM indexer (drop-in for IndexerOMP) |
midas-fit-grain |
Single/multi-grain refiner |
midas-process-grains |
FF-HEDM grain-determination + strain pipeline |
NF-HEDM building blocks:
| Sub-package | Role |
|---|---|
midas-nf-preprocess |
NF-HEDM preprocessing (hex grid, tomo filter, spot prediction) |
midas-nf-fitorientation |
NF-HEDM orientation/calibration fitter |
Shared foundations:
| Sub-package | Role |
|---|---|
midas-stress |
Crystallographic stress/strain analysis (Voigt-Mandel, Cij inversion, slip/Schmid/Taylor) |
midas-params |
Parameter-file registry, validator, wizard for FF/NF/PF/RI |
midas-hkls |
Pure-Python crystallography & HKL list generator (sginfo-equivalent) |
midas-diffract |
End-to-end differentiable HEDM forward model (FF + NF + pf-HEDM) |
midas-integrate |
Pure-Python radial integration (DetectorMapper + CSR + streaming server) |
midas-integrate-v2 |
Differentiable, autograd-clean integration kernels (torch); companion to v1 |
midas-calibrate |
Native Python/Torch detector geometry calibration (LM-based) |
midas-calibrate-v2 |
Torch-native Bayesian/Laplace calibration (LM + L-BFGS); companion to v1 |
You then import midas_stress, import midas_diffract, etc. directly —
each sub-package retains its own API. midas-suite does not re-export
them.
To check what was installed:
import midas_suite
print(midas_suite.installed())
Modality bundles
If you don't want everything, the optional extras let you pick a workflow:
pip install "midas-suite[ff]" # FF-HEDM stack
pip install "midas-suite[pf]" # PF-HEDM stack (scanning / point-focus)
pip install "midas-suite[nf]" # NF-HEDM stack
pip install "midas-suite[calib]" # v1 calibration + integration
pip install "midas-suite[calib-v2]" # v2 (torch differentiable) calibration + integration
pip install "midas-suite[ff,plots]"
| Extra | What it pulls |
|---|---|
ff |
midas-ff-pipeline (transitively pulls hkls, peakfit, transforms, index, fit-grain, process-grains, diffract, parsl-configs) + stress, params, calibrate, integrate |
pf |
midas-pipeline[fast] (numba) + stress, params, calibrate, integrate (scan-mode pf pulls index + fit-grain + transforms + stress transitively) |
nf |
midas-nf-pipeline (transitively pulls hkls, stress, nf-preprocess, nf-fitorientation) + params |
calib |
hkls, integrate, peakfit, calibrate (v1 C-backed stack) |
calib-v2 |
hkls, calibrate-v2, integrate-v2, peakfit (torch differentiable stack) |
plots |
matplotlib (for sub-package plotting helpers) |
What pip install midas-suite does NOT include
Be aware:
- The MIDAS C executables (
IndexerOMP,ProcessGrains,MakeDiffrSpots, …) still need to be built from source viacmake --build .from the MIDAS monorepo. The pure-Python pipeline (calibration → integration → indexing → grain processing) is now end-to-end in PyTorch and does not require them. - The PyQt FF viewer GUI needs
PyQt5orPySide6installed separately. Not declared here because it's optional and platform-sensitive. - Optional crystallography backends for
midas-hkls: installgemmiorpycifrwseparately for CIF I/O viapip install midas-hkls[cif]. - GPU acceleration is a runtime backend selected by PyTorch device
string. CUDA/MPS just work if your
torchinstall supports them; no separate*-gpupackage needed. - Unpublished packages:
midas-ckernel(its C is vendored intomidas-index/midas-fit-grain, so nothing needs it from PyPI) andmidas-dct-tt(in development). Everything else the suite names is on PyPI, including the research packagesmidas-grain-odf,midas-pf-odf,midas-pink,midas-propagate,midas-uqandmidas-joint-ff-calibrate.
The c-omp binaries — check you actually got them
midas-index and midas-fit-grain each bundle a C/OpenMP executable
(midas_indexer, midas_fitgrain). These are the fast path: the pure-Python
backends do the same job far more slowly.
Both publish as sdist only, so pip compiles them on your machine during install. CMake and ninja arrive automatically as build requirements — you do not need them preinstalled. What you do need is a C compiler and OpenMP:
| platform | what to install |
|---|---|
| macOS | brew install libomp gcc |
| Linux | your distro's gcc (usually pulls in libgomp) |
| Windows | Visual Studio Build Tools, "Desktop development with C++" |
If either is missing the install still succeeds — CMakeLists.txt probes
with check_language(C) and returns cleanly rather than failing the wheel
build, leaving you on the Python-only path. That is deliberate, but it means
the degradation is easy to miss: pip's build isolation buries the CMake
warning, and pip install -q hides it entirely. A slow pipeline with no error
message is the usual symptom.
So check explicitly after installing:
import midas_index.backend_c as b
print(b.available()) # True -> c-omp indexer present
print(b.binary_path()) # where it looked
import midas_fit_grain.backend_c as f
print(f.available()) # same for the refiner
available() == False means you are on the Python path. Install the compiler
and OpenMP for your platform, then
pip install --force-reinstall --no-deps midas-index midas-fit-grain to
rebuild.
Cross-platform
Most MIDAS sub-packages are pure Python or PyTorch and ship as py3-none-any
wheels. The exceptions are midas-index and midas-fit-grain, which are
sdist-only and compile a C/OpenMP binary at install time (see above) — that is
why there are no per-platform binary wheels to maintain. Tested install paths:
Linux, macOS, Windows. See
packages/RELEASE_READINESS.md for the detailed
cross-platform readiness matrix.
Versioning
midas-suite versions are independent of the sub-package versions.
The rule:
| Change | Bump |
|---|---|
| Floors tightened (no new sub-package added) | patch (0.1.0 → 0.1.1) |
| New sub-package added to the dep list | minor (0.1.0 → 0.2.0) |
| Backwards-incompatible reorganisation of bundles | major (0.x.y → 1.0.0) |
Floors are pinned with >=, never ==, so a sub-package patch release
doesn't break midas-suite.
Releasing a new version
See RELEASING.md for the full release flow. TL;DR:
cd packages/midas_suite
./release.sh 0.3.2 --publish
License
BSD-3-Clause, same as the sub-packages.
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