Skip to main content

A minimalistic ODE solvers library built on top of PyTorch

Project description

mini-ode

A minimalistic, multi-language library for solving Ordinary Differential Equations (ODEs). mini-ode is designed with a shared Rust core and a consistent interface for both Rust and Python users. It supports explicit, implicit, fixed step and adaptive step algorithms.

crates.io version crates.io downloads         PyPI version PyPI monthly downloads         License: GPL-2.0

✨ Features

  • Dual interface: call the same solvers from Rust or Python
  • PyTorch-compatible: define the derivative function using PyTorch
  • Multiple solver methods: includes explicit, implicit, and adaptive-step solvers
  • Modular optimizers: implicit solvers allow flexible optimizer configuration

🧠 Supported Solvers

Solver Class Method Suitable For Implicit Adaptive Step
EulerMethodSolver Euler Simple, fast, and educational use.
RK4MethodSolver Runge-Kutta 4th Order (RK4) General-purpose with fixed step size.
ImplicitEulerMethodSolver Implicit Euler Stiff or ill-conditioned problems.
GLRK4MethodSolver Gauss-Legendre RK (Order 4) High-accuracy, stiff problems.
RKF45MethodSolver Runge-Kutta-Fehlberg 4(5) Adaptive step size control.
ROW1MethodSolver Rosenbrock-Wanner (Order 1) Fast semi-implicit method for stiff systems. semi

📦 Building the Library

Rust

To build the core Rust library:

cd mini-ode
cargo build --release

Python

To build and install the Python package (in a virtual environment or Conda environment):

cd mini-ode-python
LIBTORCH_USE_PYTORCH=1 maturin develop

This builds the Python bindings using maturin and installs the package locally.

🐍 Python Usage Overview

To use mini-ode from Python:

  1. Define the derivative function f(x: torch.Tensor, y: torch.Tensor) -> torch.Tensor:
    • x is a scalar tensor (rank 0, shape ()).
    • y is a 1D tensor (rank 1, shape (n,) where n is the dimension of the state vector).
    • The function must return a 1D tensor of the same shape as y (i.e., (n,)).
  2. Trace the function using torch.jit.trace to convert it to TorchScript. Provide example inputs matching the shapes (e.g., torch.tensor(0.) for x and torch.tensor([0.] * n) for y).
  3. Create a solver instance, configuring parameters like step size or optimizer as needed.
  4. Call solver.solve(traced_f, x_span, y0):
    • x_span: A tuple (start, end) for the integration interval.
    • y0: Initial state as a 1D tensor (shape (n,)).
    • Returns: (xs, ys) where xs is a 1D tensor of x-values (shape (num_points,)), and ys is a 2D tensor of y-values (shape (num_points, n)).
      • For fixed-step solvers, xs is evenly spaced (e.g., via torch.linspace).
      • For adaptive-step solvers, xs has a variable number of points based on error control.

Example usage flow (not full code):

import torch
import mini_ode

# 1. Define derivative function using PyTorch
def f(x: torch.Tensor, y: torch.Tensor):
    return y.flip(0) - torch.tensor([0, 1]) * (y.flip(0) ** 3)

# 2. Trace the function to TorchScript
traced_f = torch.jit.trace(f, (torch.tensor(0.), torch.tensor([0., 0.])))

# 3. Create a solver instance
solver = mini_ode.RK4MethodSolver(step=0.01)

# 4. Solve the ODE
xs, ys = solver.solve(traced_f, (0., 5.), torch.tensor([1.0, 0.0]))

🔧 Using Optimizers (Implicit Solvers Only)

Some solvers like GLRK4MethodSolver or ImplicitEulerMethodSolver require an optimizer for nonlinear system solving:

optimizer = mini_ode.optimizers.CG(
    max_steps=5,
    gtol=1e-8,
)

solver = mini_ode.GLRK4MethodSolver(step=0.2, optimizer=optimizer)

🦀 Rust Usage Overview

In Rust, solvers use the same logic as in Python - but you pass in a tch::CModule representing the TorchScripted derivative function.

Example 1: Load a TorchScript model from file

This approach uses a model traced in Python (e.g., with torch.jit.trace) and saved to disk.

use mini_ode::Solver;
use tch::{Tensor, CModule};

fn main() -> anyhow::Result<()> {
    let solver = Solver::Euler { step: 0.01 };
    let model = CModule::load("my_traced_function.pt")?;
    let x_span = (0.0, 2.0);
    let y0 = Tensor::from_slice(&[1.0f64, 0.0]);

    let (xs, ys) = solver.solve(model, x_span, y0)?;
    println!("{:?}", xs);
    Ok(())
}

Example 2: Trace the derivative function directly in Rust

You can also define and trace the derivative function in Rust using CModule::create_by_tracing.

use mini_ode::Solver;
use tch::{Tensor, CModule};

fn main() -> anyhow::Result<()> {
    // Initial value for tracing
    let y0 = Tensor::from_slice(&[1.0f64, 0.0]);

    // Define the derivative function closure
    let mut closure = |inputs: &[Tensor]| {
        let x = &inputs[0];
        let y = &inputs[1];
        let flipped = y.flip(0);
        let dy = &flipped - &(&flipped.pow_tensor_scalar(3.0) * Tensor::from_slice(&[0.0, 1.0]));
        vec![dy]
    };

    // Trace the model directly in Rust
    let model = CModule::create_by_tracing(
        "ode_fn",
        "forward",
        &[Tensor::from(0.0), y0.shallow_clone()],
        &mut closure,
    )?;

    // Use an adaptive solver, for example
    let solver = Solver::RKF45 {
        rtol: 0.00001,
        atol: 0.00001,
        min_step: 1e-9,
        safety_factor: 0.9
    };
    let x_span = Tensor::from_slice(&[0.0f64, 5.0]);

    let (xs, ys) = solver.solve(model, x_span, y0)?;
    println!("Final state: {:?}", ys);
    Ok(())
}

📁 Project Structure

mini-ode/           # Core Rust implementation of solvers
mini-ode-python/    # Python bindings using PyO3 + maturin
example.ipynb       # Jupyter notebook demonstrating usage

📄 License

This project is licensed under the GPL-2.0 License.

👤 Author

Antoni Michał Przybylik
📧 antoni@taon.io
🔗 https://github.com/antoniprzybylik

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

mini_ode-0.1.4-cp313-abi3-manylinux_2_39_x86_64.whl (497.1 kB view details)

Uploaded CPython 3.13+manylinux: glibc 2.39+ x86-64

File details

Details for the file mini_ode-0.1.4-cp313-abi3-manylinux_2_39_x86_64.whl.

File metadata

File hashes

Hashes for mini_ode-0.1.4-cp313-abi3-manylinux_2_39_x86_64.whl
Algorithm Hash digest
SHA256 afc20ffc3dea0d49aab0c5a31ffef258f79696dbb7dea17d2d98880f3a21af9d
MD5 db501652c389bfe6d2d1636b51c911ed
BLAKE2b-256 996b17a16ff74e24d32414b5b4057d52070cf2e65136dcffbb60c69850cac165

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page