mmap_ninja_dataframe: Memory mapped data structures
Project description
mmap_ninja_dataframe
Memory-mapped dataframe abstraction based on mmap_ninja
Run tests:
uvx --with-editable . --with joblib --with zstandard --with dnn_cool_synthetic_dataset --with opencv-contrib-python --with transformers pytest
TextPropertiesMmap
TextPropertiesMmap stores unique texts and their computed properties (e.g. embeddings, token counts) as memory-mapped arrays. Texts are deduplicated by content hash. Properties can be added incrementally — a property does not need to be fully computed before the store is used.
Create from a list of texts
from mmap_ninja_dataframe import TextPropertiesMmap
store = TextPropertiesMmap.from_texts(
out_dir="my_store",
texts=["Hello, world!", "Memory maps are fast.", "Another sentence."],
)
Add a text and get its index
idx = store.add("A new sentence.")
# Returns the index. If the text already exists, returns its existing index without duplicating.
Add multiple texts
indices = store.update(["First.", "Second.", "Hello, world!"])
# "Hello, world!" already exists — its existing index is returned, store does not grow.
Add a computed property
import numpy as np
embeddings = [np.random.rand(768).astype(np.float32) for _ in range(len(store))]
store.add_property("embedding", embeddings)
Properties can be added partially — the array does not need to cover all texts yet:
store.add_property("token_count", [np.array([5]), np.array([4])]) # only first two texts
Query property status
result = store.get_property("embedding")
print(result.unprocessed_count) # number of texts without this property computed
print(result.staging_files_count) # number of pending staged result files
print(len(result.mmap)) # number of computed results
Get unprocessed indices
indices = store.get_unprocessed_indices_for_property("embedding")
texts_to_process = store.text[indices]
Stage and flush results
Use set_results_for_property to stage results (e.g. from a batch inference job). Results are flushed automatically when they can be applied in order:
batch_texts = ["First.", "Second."]
batch_embeddings = [np.random.rand(768).astype(np.float32) for _ in batch_texts]
store.set_results_for_property("embedding", batch_texts, batch_embeddings)
# Explicitly flush any remaining staged results:
store.flush_results_for_property_if_possible("embedding")
Look up properties by text
props = store.get_text_properties("Hello, world!")
# {"embedding": array([...]), "token_count": array([5])}
# If a property is not yet computed for this text, it appears in props["unprocessed"]
Fetch properties for multiple texts
result = store.get_properties_for_texts(["Hello, world!", "Memory maps are fast."])
# {"text": [...], "content_hash": [...], "idx": [0, 1], "embedding": [...]}
# Raises KeyError for unknown texts, ValueError if any property is not fully computed.
Check overall status
status = store.get_status()
# Returns a list of PropertyResult for properties that are not yet fully computed.
for r in status:
print(r)
Delete a property
store.delete_property("embedding")
# Removes the mmap directory and any staged files for that property.
List computed properties
store.get_properties() # ["embedding", "token_count"]
# Does not include "text" or "content_hash" — use store.text and store.content_hash directly.
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